Bartonella alsatica: HWV54_01230
Help
Entry
HWV54_01230 CDS
T06670
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bals
Bartonella alsatica
Pathway
bals03410
Base excision repair
bals03430
Mismatch repair
bals03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bals00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HWV54_01230 (recJ)
03430 Mismatch repair
HWV54_01230 (recJ)
03440 Homologous recombination
HWV54_01230 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bals03400
]
HWV54_01230 (recJ)
DNA repair and recombination proteins [BR:
bals03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HWV54_01230 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HWV54_01230 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HWV54_01230 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
FmrO
GLUCM-like_C
CDC45
Motif
Other DBs
NCBI-ProteinID:
QLC51599
LinkDB
All DBs
Position
complement(275471..277255)
Genome browser
AA seq
594 aa
AA seq
DB search
MQRSRYFLNVESSACGQAWLDALDIQGVNNARAISQKFGFPDQLARVLSARHVDESEAVA
FINPMLRTLMPDPKSFTDMQCAAERIVKAILNQEKVAVFGDYDVDGACSSALIARFLRYL
NIEVKIYIPDRIAEGYGPNEQAMRMLVQQGAHLIITVDCGANSPDAVKAARLAGAEVVIL
DHHQMSEIHQEAFALVNPNRSDDFSGQGHLCAAGVVFVTLAWVHHLLRKKKFRGKLPDLL
SMLDLVALATICDVVPLQGVNRAFVIKGLQVARSMHNPGIAALTKVARIGEPLNSFHLGF
LLGPRINAGGRIGDQALGAHLLSCENKDEAEKIAEQLNQLNQERQEMESIQLAQAESYID
THYQDRETPLSIVIAHQEWHPGIIGILASRLKERFFCPVFAIALKEDGSGVGSGRSISGI
DLGALVREAVTLNLLEKGGGHSMAAGITIKSTKIEVFREWLEEKVSSIVSQLRTEKSLSI
DGCLSASGANKALFDMIEKAGPFGSGNTTPVFVLPSHRLINLCEVGKGHLRLVMSNIEGN
KLQGVAFRAVGTSLGDFLFENLGKMIHLAGNLSLNYWNGTINPQLRVIDAAAVV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggtcccgttattttcttaatgttgaatcttctgcttgtggtcaggcatggtta
gatgctcttgatattcaaggggtgaataatgcgcgtgctatttctcaaaaatttggtttt
ccagatcagttagctcgtgttctctcggcaagacatgtggatgaatctgaagctgttgct
tttatcaatccaatgttgcgtactctcatgcctgatccaaaaagttttacggatatgcaa
tgtgcagcagagcgcatcgtgaaagctattttgaatcaagaaaaagttgcagtttttggt
gattatgacgttgatggtgcttgttcatcagcacttatagcgcgctttctccgttatttg
aatatcgaagtaaaaatttatattcctgatcgtattgctgaaggatatggtccgaatgaa
caagcaatgaggatgttagtacaacaaggtgcccatttgattatcacagttgattgtggt
gcgaacagtccagatgcagtaaaagcagcaaggcttgcaggcgctgaggttgtgatttta
gatcatcatcaaatgtcagagattcatcaagaagcttttgctcttgtcaatcctaatcgt
tctgatgatttttctggacaagggcatttatgtgctgctggcgttgtctttgttacgtta
gcatgggttcatcatttgttgcgaaagaagaaatttagaggaaaacttcctgaccttcta
agtatgcttgatcttgttgcattggcaacaatatgtgatgttgttccattacaaggtgta
aaccgtgcttttgtgattaaaggacttcaagttgcccgttctatgcataatcctgggata
gcagctttaacaaaggttgcacgtataggtgaaccgcttaatagttttcatttaggtttt
ttgttaggccctagaattaatgcgggaggacgtattggtgaccaagctttgggagcacat
ttgcttagctgtgagaataaagatgaagctgaaaaaatagcagaacaattgaatcaactt
aatcaagaacgtcaagaaatggagagcattcaattagcgcaggcagaatcttatattgat
actcattatcaagatcgagaaacaccattgtcaattgtgattgctcatcaagaatggcat
ccgggaatcattggtattctcgcatctcgcttaaaagagcgttttttttgtcctgttttt
gccattgctttaaaagaagatggaagcggtgtgggatcaggacgttcaattagcggcata
gatttaggagcacttgttcgtgaagctgttacattaaatttattagaaaaagggggaggg
catagtatggcagcagggatcacaatcaaatcgacaaaaattgaagtttttcgagaatgg
ctggaagagaaagtttcttcaatagtttcacagttgcgtactgaaaagtctcttagtata
gatggttgtctttctgcttcgggtgctaataaagcgctttttgatatgattgaaaaagca
gggccatttggttcagggaatactacacctgtttttgttcttccctctcaccgattaatt
aatctgtgcgaggttgggaaagggcatctgcgccttgttatgtctaatattgaaggaaac
aaactgcaaggagtagctttccgtgctgtgggaacatcgcttggtgattttctttttgaa
aatcttggtaaaatgattcatttggctggtaatcttagtttgaattattggaatggaaca
atcaatcctcaactacgtgtgattgacgcagcagcagtggtttga
DBGET
integrated database retrieval system
