Bartonella alsatica: HWV54_01350
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Entry
HWV54_01350 CDS
T06670
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bals
Bartonella alsatica
Pathway
bals03420
Nucleotide excision repair
bals03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bals00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HWV54_01350
03430 Mismatch repair
HWV54_01350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bals03400
]
HWV54_01350
Enzymes [BR:
bals01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HWV54_01350
DNA repair and recombination proteins [BR:
bals03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HWV54_01350
MMR (mismatch excision repair)
Other MMR factors
HWV54_01350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
DUF3553
AAA_11
Tudor_1_RapA
NUP120_helical_2
Motif
Other DBs
NCBI-ProteinID:
QLC51621
LinkDB
All DBs
Position
309521..311857
Genome browser
AA seq
778 aa
AA seq
DB search
MNNFPDHIPFFEEDALPLQNKKSSGVTTHTLTIKEQTQCGIDYLEQLNPEQRQAVMNTEG
PLLVLAGAGTGKTRVLTTRISHILRSGLASPRQILAVTFTNKAAREMKMRIGELIGEIVE
GMPWLGTFHSIGAKILRRHAELVNLKSNFTILDNDDVTRLLKQLIQAKGLDDKRWPARNL
AVIIDSWKNQGLSPQHISESDAHSFGNGMGRELYRSYQDRLKSLNACDFGDLLLHSISIF
QHNPDILQEYHSKFLYILVDEYQDTNTAQYLWLRLLAQQSKGKDINICCVGDDDQSIYGW
RGAKVDNILRFEKDFPPAKIIRLERNYRSTSHILKTASHLISHNQGRLGKILFSDQINTE
EEKVKIHTAWDSEEEARAIGEEIERAQQAGHSLNHMAILVRASFQMREFEDCFVTLGLNY
RVIGGPRFYERMEIRDAMAYLRVVVQPADDLAFERIINTPKRGLGDATLRTLYESARARA
IPLFSAAAAIIETDELKPKARSALRSVIENFRRWQNMLQCTPHKELAETILDDSGYTAMW
LEDRSPEAATRLENLKEMIRSMEQFESLNSFLEHVALIMDAESNENTDAINIMTLHSAKG
LEFETVFLPGWEEGLFPHQRSLDEGGRLGLEEERRLAYVGLTRAKKYLHIWFVSNRKIHG
LWQSALPSRFLDELPEEHVEAIEMRTSYGGYGKSSLKPHNPFYNDYATPEQKRAQKSIKE
KIITQSLSETTQDFSINDRIFHIKFGYGQITEIDNHKLTIMFEKAGEKRVLDNFVSKV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaataattttcctgatcacataccattctttgaagaagatgctctccctctccaaaat
aaaaagagctctggggtgactacccatactttaacaataaaagagcaaacacaatgtggt
atcgattatttggaacaactcaatcccgaacagcggcaagctgtaatgaatactgaaggg
ccactgttagttcttgcaggagctggtactggaaaaacacgagttttgacgacacgtatt
tctcatattttgcgctccgggctcgcctctcctaggcaaatacttgctgtaactttcacc
aataaagcagcacgtgaaatgaaaatgcgtattggtgaacttattggtgaaattgttgaa
ggcatgccctggcttggaacctttcattccatcggtgcaaaaattttgcgccgtcatgca
gaacttgttaatttaaaaagcaattttacaattcttgataatgatgatgttactcggctt
ttaaaacagcttattcaagctaaaggcttggatgataaacgttggcccgcacgaaacctt
gccgtaataattgattcttggaaaaatcaaggactttcaccacaacacatttcagaaagc
gatgcccattcctttggaaatggcatgggacgtgaactttatcgtagctatcaggataga
ttaaaaagccttaacgcctgcgatttcggtgatctgctactgcattctatctctatcttt
caacataatccagatattcttcaagaatatcattccaaatttctctatattcttgtagat
gaatatcaagatacgaatacagcacaatatctttggcttcgccttttggcacaacagtct
aaagggaaagatattaacatttgttgtgttggtgacgacgaccagtctatttacgggtgg
cgaggtgctaaagttgacaatatattgcgctttgaaaaagattttcctcctgcaaaaatt
attcgtttagaacgcaattatcgttcaacatcacacattctcaaaactgcttctcacctc
atttctcacaaccaaggaagacttggaaagatacttttctctgatcaaataaataccgaa
gaagaaaaagtaaaaattcatacagcgtgggattccgaagaggaagcgcgcgcaattgga
gaagaaattgaacgtgcacaacaagcaggtcattcattaaatcatatggctatattggtg
cgtgcatcatttcaaatgcgtgaatttgaagattgttttgtaacacttggactcaattac
cgtgttattggcggtccacgcttttatgaacgaatggaaatacgtgatgccatggcttat
ttgcgcgttgttgtccaaccagcagatgacctagcctttgaacgtattatcaatacacct
aaacgcggcttaggagatgcaactctacgcaccctttatgagagtgcacgtgcacgtgct
attcctctcttttctgctgctgcagcaataattgaaacagatgagttaaaacccaaagca
cgcagtgctttgcgaagtgttattgaaaactttcgccgttggcaaaatatgctgcaatgc
actccccataaagaacttgccgaaacaattcttgatgattcaggctacacagctatgtgg
ttagaagatcgttcacctgaagcagcaacacgattagaaaatcttaaagaaatgatccgt
tctatggagcaatttgaaagccttaacagctttctagaacatgttgcactgattatggat
gctgaaagcaacgaaaacactgatgcaatcaatattatgactcttcattcagccaaaggg
cttgaatttgaaacagtttttcttcctggttgggaagaaggtctctttcctcaccaacgc
tcattggatgaaggaggtcgtttaggattagaggaagaacgtcgactagcttatgtagga
ctgacaagagcaaaaaaatatttacatatatggtttgtatccaatcgaaaaattcacgga
ctttggcaatctgcacttccttctcgttttttggatgaattaccagaagagcatgtagaa
gctatagaaatgcgaacatcttacggtggttatggaaagtcttccttgaaacctcacaat
cccttttataatgattatgctacaccagaacaaaaacgtgcacaaaaaagtattaaagaa
aaaatcataacccaatcactctctgaaacaacccaagatttttcaattaatgatcggatc
tttcatataaaattcggttatggtcagatcacagagatagataatcataaattaactatt
atgtttgagaaagctggagaaaagcgagtccttgataattttgtaagcaaagtttaa
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