KEGG   Bartonella alsatica: HWV54_03955
Entry
HWV54_03955       CDS       T06670                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bals  Bartonella alsatica
Pathway
bals03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bals00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HWV54_03955 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bals03021]
    HWV54_03955 (rho)
   03019 Messenger RNA biogenesis [BR:bals03019]
    HWV54_03955 (rho)
Transcription machinery [BR:bals03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     HWV54_03955 (rho)
Messenger RNA biogenesis [BR:bals03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     HWV54_03955 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 AAA_22 OB_RNB NACHT S1CSD-TOTE-2 AAA
Other DBs
NCBI-ProteinID: QLC52054
UniProt: A0ABX6QG00
LinkDB
Position
complement(944235..945500)
AA seq 421 aa
MQEMKLQELKSKNPVELVSFAETLEVENASLMRKQELMFAILKKLASQDVEIIGEGVVEV
LQDGFGFLRSADANYLPGPDDIYLSPAQIQSFSLKTGDTVEGPIRSPKEGERYFALLKIN
TINFEDPEKIRYKIHFDNLTPLYSNERFQMEIQDPTEKDMSSRVIDLISPLGKGQRGLIV
APPRTGKTVLLQNIAHSITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAI
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEELLVARQDLHKIFVLRRILAPMNVTDAIEFLIDKLKQTKNNSEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaagaaatgaaactacaagaacttaaaagtaaaaatcccgttgaacttgtttctttt
gctgaaacattggaagttgaaaatgcttctttgatgcgcaagcaagaattaatgtttgct
atcttgaaaaaacttgcttcgcaagatgtagaaattataggagaaggagttgttgaagtt
ttacaagacggatttggatttttgcgatctgctgatgctaattatcttccgggtcctgat
gatatttatctttcacctgcacaaattcagtctttttctttaaaaacaggcgatactgtt
gaaggtcccatacgaagtccaaaagaaggagaacgttattttgctcttcttaaaattaat
acaattaattttgaagatcctgaaaaaattcgttataaaatacactttgataatctcact
cccctttattcaaatgaacgttttcagatggaaatacaagatcctacagaaaaggatatg
tcatcacgggtgatcgatttgatctctccgttgggaaaaggtcagcgaggattaattgta
gcccctcctcgaacaggtaaaacggttttacttcaaaatattgctcattctatcaccacc
aatcatcctgagtgttatctcattgttcttttaatagatgaacgaccagaagaagttact
gatatgcagcgttctgttaaaggagaggtggtttcttctacttttgatgaaccagcaata
cgtcatgttcaagtggctgagatggttattgaaaaagctaaacgcctcgttgaacatggg
cgtgatgttgttattcttctcgattctattacacgtcttgggcgtgcatataacacggtt
gttccttcatcaggtaaagttttaacaggtggtgtggatgcaaatgctttacaacgtcca
aaacgtttttttggtgcagcacgtaacattgaagaaggtgggtctttaactattattgca
acggctttgattgatactggtagtcgtatggatgaagttatttttgaagagtttaaagga
acaggtaattcagaaattgttcttgatcgtaaagttgctgataaacgtattttcccagct
atggatatcttaaagtcaggaacacgcaaagaagaactcttagttgcacgacaagattta
cacaaaatttttgtacttcgtcgtattttagcacctatgaatgttacagatgcgattgaa
tttttgattgataaattaaaacaaactaaaaataatagtgagttttttgattcaatgaat
acataa

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