Bartonella alsatica: HWV54_04210
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Entry
HWV54_04210 CDS
T06670
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bals
Bartonella alsatica
Brite
KEGG Orthology (KO) [BR:
bals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bals03016
]
HWV54_04210 (thpR)
Enzymes [BR:
bals01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HWV54_04210 (thpR)
Transfer RNA biogenesis [BR:
bals03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HWV54_04210 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Acb1
Motif
Other DBs
NCBI-ProteinID:
QLC52095
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Position
complement(1019930..1020469)
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AA seq
179 aa
AA seq
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MCRLFSALQIPQKTTETLISLQKGLPNAQWIKSQNFHVTLSFFGEVKSSVADELMCAFDT
IKIPPFVLKTKGFEVFGSKNAPHSLVVLIEPCETLNLLHEKMQCIRNSLSLTPDEKQFIP
HITIARLLNIKPEDLPSYISSQNNFSFPSFKVDHFVLLLSPSPSSDAPYILKGSWSLQK
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgtttatttagtgctcttcagattcctcaaaaaacaactgaaacactcatatcg
ctgcaaaagggcttaccgaacgcgcagtggatcaaatcacaaaattttcatgttacttta
tctttttttggtgaagttaaaagttcagtagcagatgaacttatgtgcgcctttgataca
ataaagatccctccttttgtgctaaaaacaaagggttttgaagtctttggttcaaaaaac
gctccacattctcttgttgttcttattgaaccttgtgaaactctcaatcttttacacgaa
aagatgcaatgtattcggaacagcttgagcttaacacctgatgaaaaacagtttattccg
catattactattgcgcgactgctcaatattaagccggaagatcttccttcttacatatct
tctcaaaataatttttcatttccttctttcaaagtcgatcatttcgttttattgttatcg
ccatccccctcaagcgatgctccgtatattttgaaaggaagttggtcacttcaaaagtaa
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