Bartonella alsatica: HWV54_05115
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Entry
HWV54_05115 CDS
T06670
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bals
Bartonella alsatica
Pathway
bals03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bals00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HWV54_05115 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bals03400
]
HWV54_05115 (mutM)
Enzymes [BR:
bals01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HWV54_05115 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HWV54_05115 (mutM)
DNA repair and recombination proteins [BR:
bals03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HWV54_05115 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QLC52251
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All DBs
Position
1252130..1253005
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AA seq
291 aa
AA seq
DB search
MPELPEVETVRRGLEPIITDAKIISVMLNRRDLRFPFPEAFSERLMGRTIIELRRRAKYL
LFHLSQNETILSHLGMSGSWRIEDDLLRKASSTTSKFIKHDHFVMYIQAKDGKFYHLTYN
DVRRFGFMLLVDTTRLYEHKLLKRLGIEPMSNTFSGSYLQKAFVNKKISLKRVLLDQSVV
AGLGNIYVCEALWRSRLSPQRGAFTLASKTIRAREFADSLAQNIRNVISEAILSGGSSLR
DYMHVDGSLGYFQHAFSVYGREGKECFQCGTPIVRILQSGRSSFYCSQCQK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttcctgaagtagaaaccgttcgtcgtggacttgagccgattataacggat
gcaaagattatatctgttatgcttaatcgtagagatttgaggtttcctttccctgaggcg
ttttctgagcggcttatggggcggacgattatagagcttagacgacgcgcgaaatatttg
ttgtttcatctttcacaaaatgaaacgattttgagccatttaggaatgtcgggatcatgg
cgcatagaggatgatcttttaagaaaagcatcttctactacaagtaaatttattaagcat
gatcactttgttatgtatattcaggccaaggatggaaaattttatcatcttacttataat
gatgtacgtcgttttggatttatgcttttagtagatacaaccagactttatgaacataaa
cttttaaagaggctagggattgagcctatgagtaatacattttctggtagttatttacaa
aaggcttttgttaataaaaaaatatctcttaagagagttttgcttgatcagtctgtcgtt
gcgggtcttgggaatatttatgtttgcgaagcactttggcgtagtcgcttatctccacaa
cggggtgcatttacattagcatctaaaactatacgtgcacgtgaatttgcagattcttta
gcgcaaaatatacgcaatgttatttctgaagctattttgtctggtggatcttctttacgt
gattatatgcatgtagatggctcacttggttattttcaacatgctttttcagtttatgga
cgagaaggcaaagaatgttttcaatgtggaacgcctatcgttcgtattttgcaatctggg
cgttcaagtttttactgttcacagtgtcaaaaatga
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