Bartonella alsatica: HWV54_06490
Help
Entry
HWV54_06490 CDS
T06670
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bals
Bartonella alsatica
Pathway
bals03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bals00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HWV54_06490 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bals03021
]
HWV54_06490 (rpoB)
03400 DNA repair and recombination proteins [BR:
bals03400
]
HWV54_06490 (rpoB)
Enzymes [BR:
bals01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HWV54_06490 (rpoB)
Transcription machinery [BR:
bals03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HWV54_06490 (rpoB)
DNA repair and recombination proteins [BR:
bals03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HWV54_06490 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QLC52485
LinkDB
All DBs
Position
1577181..1581332
Genome browser
AA seq
1383 aa
AA seq
DB search
MAQTLAMMSQFNGRKRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPKGGRPDEGLQ
AVFKSVFPISDFSGTAMLEFVGYEFDLPKFDVEECRQRDLTYAAPLKVILRLIVFDVDED
TGSKDIKDIKEQGVYMGDMPLMTSNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSG
KFLFAARVIPYRGSWLDIEFDAKDIIYARIDRRRKIPVTSLLMALGMDASDILSTFYNKV
TYERDGDGWRIPYSVDRFKGVKLVSDLIDADSGEVVAEAGKKLTVRAAKSLAEKGLKAVK
VSEEDLLGCYLSEDIVNYQTGEIYLEAGDEIDEKILKILLDVNANQINILDIDHMNVGAY
IRNTLKVDKNESRQDALFDIYRVMRPGEPPTMDTAEAMFHSLFFDPERYDLSAVGRVKMN
LRMDLDCPDTVRTLRQEDILAVVKMLVELRDGRGEIDDIDNLGNRRVRSVGELMENQYRI
GLLRMERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITH
KRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGF
IESPYRKIIDGKVTTEVIYLSAMEESKHYVAQANSSLDVEGRFTEEFVVCRHAGEVLMAP
RDHVDLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLIRAEAPFVGTGMES
IVARDSGAAVSAKRGGIVDQVDATRIVIRATEDLDPSKSGVDIYRLQKFQRSNQSTCINQ
RPLVHVGDRIEKGDIIADGPSTDLGDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDV
FTSIHIEEFEVAARDTKLGPEEITRDIPNVSEEALRNLDEAGIIYIGAEVQPGDILVGKI
TPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMA
IEREEIERLAKDRDDEQSILDRNVYARLADMLIGKIAVEGPKGFSSNKELDNAIMERYPR
SQWWQFSVEDEKLQSEIEALRKQYDESKEALQRRFMDKVEKVQRGDEMPPGVMKMVKVFV
AVKRKIQPGDKMAGRHGNKGVVSRILPVEDMPFLEDGTHADIVLNPLGVPSRMNVGQILE
THLGWACAGMGKKIGDLIEAYQETGDILPLRQRIENFIPDNGRNEPIRQYDNESLYKLAL
QMRKGVSIATPVFDGAHEADINTMLEDAGLDSSGQVTLYDGRTGEPFDRPVTVGYIYMLK
LHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVK
SDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLALNVELDDARELIARRALSDT
AEQ
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccctagcgatgatgtctcaattcaatggtcgtaagcgcgtacgcaaattt
tttggtaagattcctgaagtagcagagatgccgaatcttattgaggttcaaaaagcgtca
tacgatcagtttcttatggttgaggagccgaaaggtggacgaccagatgaaggtttgcag
gctgtttttaaatcggtatttcctatttcggacttttccggtacagctatgctcgagttt
gttggttatgaatttgatttaccaaaatttgatgttgaagaatgtcgtcaacgtgatttg
acttatgctgcaccgttaaaggtaatattacgtttaattgtttttgatgttgatgaggat
actggctcgaaggatattaaagatattaaagagcagggtgtttatatgggcgatatgcct
ttaatgacgtcgaatggtacctttattgttaatggtacggaacgtgttattgtttcacag
atgcatcgttctcctggtgtcttttttgatcacgataaaggtaagtcacattcatcagga
aagtttctttttgctgctcgtgttattccttaccgtggctcttggcttgatattgaattt
gatgctaaggacatcatttatgcccgtattgatcggcgacgtaagattcctgttacgagt
cttttgatggcattaggtatggatgcatcagatattttatcgacgttttataataaagtt
acttatgaacgtgatggagatggatggcgtattccttattctgttgatcgctttaaggga
gtgaagcttgtttctgaccttatagatgcagacagtggtgaagttgttgctgaagccggt
aaaaagctaacggttcgtgctgcaaagtctttagctgagaaaggtctcaaggcggttaaa
gttagtgaggaagatttattagggtgctatctgtcggaagatatagttaattaccagaca
ggtgagatttaccttgaagctggtgatgaaattgatgagaaaatattaaagatattgctt
gatgttaatgcaaatcaaatcaatatccttgatattgatcacatgaatgttggggcatat
atccgtaatactttaaaagtggataaaaatgaaagtcgacaggatgcattgtttgatatt
taccgggtaatgcgtccaggtgagccaccaacaatggatacagcagaagctatgttccat
tcattattttttgatccagagcgttatgatctttccgctgttgggcgtgttaagatgaat
ctgcgtatggatcttgattgtccagatacggttcgcactttacgtcaagaagatattctt
gctgttgttaagatgttagttgagttgcgcgatggtcgtggggaaattgatgatattgac
aatcttggtaatcggcgcgttcgttccgttggggaattgatggaaaatcagtatcgcatt
ggtctacttcgtatggagcgtgcaataaaagagcgtatgtcatcggttgaaattgataca
gtcatgccacaggatttgataaacgcaaaacctgccgctgcagcagttcgtgaatttttt
ggatcatcgcaattatcgcagtttatggaccaaaccaatccgttatcagagatcacccat
aagcgccgtctttctgctcttggaccaggtggtttgactcgtgaacgtgcaggttttgag
gttcgtgatgtacatcctacgcattatggtcgtatttgtccgattgaaacgccggaaggt
cctaatattggtttgattaattccttagcaacattcgcgcgggttaataaatatggtttt
attgaaagtccatatcgtaagattattgatggtaaagtgacaacagaagttatttatctg
tctgctatggaagaatcaaagcattatgtagctcaagctaattcttcattggatgttgaa
ggacgttttacagaagagtttgttgtttgtcgtcatgcaggtgaagttttaatggcgccg
cgggatcatgtagatttgatggatgtttcacccaaacagttggtctcggtagcagcagcc
cttattccatttttagaaaatgatgatgcgaatcgtgcgttgatgggatcaaacatgcag
cgtcaggcagttccgcttatacgtgctgaagcaccatttgttggtacgggaatggaatca
attgttgctcgcgattcaggtgcagccgttagtgcaaagcgtggcggtattgttgatcaa
gttgatgcaacccgtattgttattcgtgcgacagaagatttagatccttcaaaatctggt
gttgacatttatcgtttacagaagtttcagcgttctaatcaatctacttgtattaatcag
cgtcctctcgtacatgttggagatcgaatagagaagggagatattattgcagatgggccc
tctacggatcttggtgatttagctcttgggcggaacgttcttgtggcttttatgccttgg
aacggatataattacgaagattccattttgttatctgaacgcattgttgctgatgacgtc
tttacttcgattcatattgaggagtttgaagttgcagcacgtgatacaaaacttggtcct
gaagaaattacacgagatattcctaacgtttccgaagaagctttaaggaatcttgatgaa
gctggtattatctatattggagctgaggttcagcctggtgatattttagtgggcaagatt
acaccaaaaggtgagagtcctatgacaccggaagaaaaacttctgcgtgcaatttttggg
gaaaaggcttcagatgttcgtgatacttctatgcgaatgcctcctgggacttttgggact
gttgttgaggttcgtgtttttaaccgccacggtgtggaaaaagatgaacgtgcgatggca
attgaacgtgaagaaattgagcgtttagctaaagatcgtgatgatgagcagtcaattctt
gatcgtaatgtttatgcacgtcttgcagatatgttgataggtaaaattgccgtagaaggt
ccaaaaggcttttcgagcaataaggagcttgacaatgcgataatggaacgttacccgcgc
tcgcaatggtggcaattttctgttgaagatgaaaagcttcaaagtgaaattgaggctttg
cgcaagcaatatgatgaatcaaaagaagcattgcaacgacgctttatggataaagttgaa
aaagtccaaagaggcgatgaaatgccacctggtgttatgaaaatggtgaaagtttttgta
gctgtgaagcgcaaaatccaaccaggtgataaaatggcagggcgtcatggtaacaagggg
gttgtatcacgtattcttcccgtagaagatatgccatttcttgaagatggaactcatgcg
gatatcgtattaaacccgcttggtgtacctagtcgtatgaatgttggtcaaattcttgaa
acacatcttggttgggcgtgtgcaggtatgggcaagaagattggagatttgatcgaggct
tatcaagaaactggtgatatacttcctttgcgtcagcggattgaaaattttattcctgat
aatggacgaaatgagccaatacgtcagtatgacaatgaaagtctttacaaattagcgcta
cagatgagaaaaggagtttcaattgcaacgcctgtttttgatggggcccatgaagctgat
atcaatacaatgttggaagatgcaggtttggatagttcaggacaggttacgctttatgat
ggtcgtactggtgagccttttgatcgtccggtgacggtggggtatatttacatgttgaaa
ttgcatcaccttgtggatgataaaattcatgcacgttcaattgggccatattcgcttgtt
acacaacagccattaggtggtaaggcgcaatttggtggtcagcgttttggtgaaatggag
gtttgggcacttgaagcttatggtgctgcatacactttacaggaaatgcttacagtgaaa
tcggatgatgtagctggtcgaacaaaagtttatgaagcaatcgtgcgcggtgacgatacg
tttgaagcgggtataccggaaagctttaatgtgttggtaaaagaaatgcgttcattggct
cttaatgtagaacttgatgatgcacgtgaacttattgcaaggcgggcattatctgataca
gcagaacaataa
DBGET
integrated database retrieval system
