Bacillus altitudinis: CFN77_02565
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Entry
CFN77_02565 CDS
T05199
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
balt
Bacillus altitudinis
Pathway
balt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
balt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFN77_02565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
balt03019
]
CFN77_02565
03009 Ribosome biogenesis [BR:
balt03009
]
CFN77_02565
Enzymes [BR:
balt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CFN77_02565
Messenger RNA biogenesis [BR:
balt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CFN77_02565
Ribosome biogenesis [BR:
balt03009
]
Prokaryotic type
rRNA helicases
CFN77_02565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ATH71143
UniProt:
A0A653M1D4
LinkDB
All DBs
Position
535756..537246
Genome browser
AA seq
496 aa
AA seq
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MTITFQDFQLSESLMKAINRMGFEEATPIQAETIPLGLQNKDVIGQAQTGTGKTAAFGIP
LVEKIDPASPNIQAIIIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRSLKK
NPHIIVGTPGRLLDHINRRTMRLQNVETVVLDEADEMLNMGFIEDIESILSNVPSEHQTL
LFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLDIHERKKFDTLTRLLDIQS
PELSIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKEGSIDVLVATDV
AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGRTGMAMTFITPREKDMLRAIEQTT
KRKMDRMKEPTLDEAIEGQQQVTIDRLRTIISENNLNFYMTAAAELLEDHDSVTVVAAAI
KMMTKEPDATPVRLTDEAPMVSKRNRNNRSSSKRRDGGGGGGYRGKSRSSYGDKKRSSND
RNRSSNDRRQKKSYNN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
ttgactataacgtttcaagattttcaattaagcgaaagtctcatgaaagctattaaccgc
atgggatttgaagaagcaacaccgattcaagcggaaacaattcctctcggtcttcagaat
aaagatgtcattggacaagcacaaacaggaacaggaaaaactgcagcgtttggtattcct
cttgtagaaaaaatcgacccagcgtctccaaatatccaagcgattatcattgcgccaaca
agagaattagcgattcaagtatctgaagagctatacaaaattggccaagacaagcgtgcg
cgcgtacttccgatttacggtggacaagatatcggtcgccaaatccgttcgctcaagaaa
aatcctcatatcatcgtagggactccaggacgtttactcgatcacattaaccgtcgtaca
atgcgtcttcaaaatgttgaaacagtcgtgcttgatgaagcagacgaaatgctaaacatg
ggtttcatcgaagacattgaatcgatcctttcaaatgtaccaagtgaacaccaaacactt
ttattctctgcgacaatgcctgcaccaattaagcgtattgcagaacgtttcatgacaaac
ccagaacacgtaaaagtaaaagcgaaagaaatgactgtatctaacatccagcagttctac
ttggatatccatgaacgtaaaaagtttgatacattgactcgtcttcttgacattcaatca
cctgagctttcaattgtcttcggccgtacaaagcgccgcgttgacgaattgactgaagca
ctgaaccttagaggttatacagctgaaggaattcatggtgacttgactcaagcgaaacgt
atggttgcgcttcgtaaattcaaagaaggttcaatcgatgtgcttgtagcaacagacgtt
gcagcacgtggacttgatatttcaggcgtaacacacgtgtataactttgacgtgccacaa
gatccagaaagctatgtacaccgtattggtcgtactggacgtgctggacgtacaggtatg
gcgatgacattcatcacaccacgtgaaaaagatatgcttcgtgcgatcgagcaaacgact
aagcgtaaaatggatcgtatgaaagaaccaacactagatgaggcaattgaaggacaacaa
caagtaaccattgatcgtctgcgcacaatcatcagtgaaaacaacttaaacttctacatg
acagcagctgctgaattgttagaagatcatgactctgttacagtggttgcggctgccatc
aaaatgatgacaaaagagccagatgcaacgcctgttcgtttgacagatgaagcaccaatg
gtttcaaaacgcaatcgtaacaaccgcagctcttcaaaacgtagagacggtggcggcgga
ggcggctatcgcggaaaaagccgttcatcttacggtgataaaaagcgttcttcaaatgac
cgcaatcgttcttctaacgatcgtcgtcaaaagaaatcttataacaactaa
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