Bacillus altitudinis: CFN77_09990
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Entry
CFN77_09990 CDS
T05199
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
balt
Bacillus altitudinis
Pathway
balt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
balt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFN77_09990 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
balt03019
]
CFN77_09990 (recQ)
03400 DNA repair and recombination proteins [BR:
balt03400
]
CFN77_09990 (recQ)
Enzymes [BR:
balt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFN77_09990 (recQ)
Messenger RNA biogenesis [BR:
balt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CFN77_09990 (recQ)
DNA repair and recombination proteins [BR:
balt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFN77_09990 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HHH
Motif
Other DBs
NCBI-ProteinID:
ATH72525
LinkDB
All DBs
Position
complement(1966119..1967900)
Genome browser
AA seq
593 aa
AA seq
DB search
MLQQAEALLKQYYGFDAFRQGQKQAIESIVNKRKDTVCIMPTGGGKSVCYQIPALMMEGT
TIVVSPLISLMKDQVDALNEMGIRSSFLNSTLSAGEMNTRLKKCEQGEYDLLYITPERLQ
NERFFQLLDRLTIPLMAIDEAHCISEWGHDFRPSYRFIQECVNKLSKRPVIVALTATATK
KVQQDICEQLGMDEEETIFTGFARENLSFQVVKGQNSDQFITQYMKKNSLESGIIYTATR
KEADQIYHRLKKQKIKAGVYHGGLDDEVREEQQNLFLNDDIQVMVATSAFGMGINKSNVR
FVIHHQIPRDIESYYQEAGRAGRDGLESECILLFSPQGVRVQRFLIEQSTEDELRYQHEL
LKLRQMVDYCHTEQCLQQFVMDYFDQSSSAPCQKCSNCLDEREREDVTREAQMVLSCTVR
MNERFGKMMIAQVLAGSKNKKVLDFGFDRLPTYALMKQHSAQHISDFIEFLITEEYLHMS
EGAFPTLKVTQKGKKVLVGQETVYKKQAIKAEAIQENDALFEQLRMVRMKLAREQGVPPF
VVFSDQTLKEMSAVEPKTEEELLNIKGVGAQKREKYGDVFLEEIRLFIEKEKK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgttacaacaagcagaagcacttcttaaacaatattatggctttgatgcttttagacaa
ggacaaaaacaggccattgaatcgattgtgaataaacggaaggatacggtctgcattatg
ccgacaggcggagggaaatcggtttgctaccagattcctgcccttatgatggaaggaacg
acaatcgttgtatctccgcttatttctttaatgaaagatcaggttgatgcgttaaatgag
atgggaatacgatcgtcctttttaaatagtacactttcagcaggtgaaatgaatacaagg
ctgaaaaaatgtgaacagggggagtatgatttgctttatatcacccctgaacgcttacaa
aatgaacgtttttttcagctgcttgatcgattgacgattcctttaatggctattgatgaa
gcgcactgtatatctgagtggggacatgattttagaccgagctatcgctttatacaagaa
tgtgtaaacaagctttcaaaaaggcctgttattgtagcattaacagccactgctacaaag
aaggtccaacaggatatatgtgagcaacttggcatggacgaagaagaaacaatctttact
ggttttgctagagaaaatttgtcttttcaagtggtgaaagggcaaaacagcgaccaattc
atcacacaatatatgaagaaaaacagtcttgagtcaggcattatttatacagccacacga
aaagaagcagatcaaatttatcatcgtctaaaaaagcaaaagatcaaagcgggtgtttat
cacggaggattagatgatgaagtcagagaagaacagcaaaatctttttttaaatgatgat
attcaagtaatggtagctacatctgcatttggtatggggattaataagtctaatgtacgt
tttgtcattcatcatcaaattccaagagatattgaaagttactaccaagaagcaggacgt
gccgggagagacgggcttgaaagtgaatgcattttactgttttcaccgcaaggcgtacgc
gtgcagcgctttctcattgaacaatcaacagaagatgaattgcggtatcagcatgaattg
ctcaagctgagacaaatggtagactactgtcatacggaacagtgccttcagcaatttgtg
atggattactttgaccaatcatcaagtgccccttgtcaaaaatgcagcaactgtctagac
gagagagagcgtgaagacgtcacgagagaagcacaaatggtgttgtcgtgtaccgttaga
atgaacgaacgattcggaaaaatgatgattgctcaagtattagccggctctaaaaacaaa
aaagtgcttgattttggtttcgaccggcttcctacttatgctttaatgaaacagcattca
gcccaacatatcagtgatttcattgagtttttaattacagaagagtatttacacatgtct
gaaggagcttttccaacactaaaagtgacacaaaaaggaaagaaagtgctagtggggcag
gagaccgtctataaaaagcaggcgataaaggcagaggctattcaagaaaatgatgcatta
tttgagcagttaagaatggtcagaatgaagttggcaagagagcagggcgttccgccattt
gttgtcttttctgatcaaacattgaaggaaatgtcagcagtagagcctaaaacagaagaa
gaacttttaaatattaaaggtgtcggcgcacaaaaaagagagaaatatggagatgttttt
ttagaagaaattcgtttatttatagaaaaagagaaaaaataa
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