Bacillus altitudinis: CFN77_10920
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Entry
CFN77_10920 CDS
T05199
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
balt
Bacillus altitudinis
Pathway
balt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
balt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFN77_10920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
balt03019
]
CFN77_10920
03400 DNA repair and recombination proteins [BR:
balt03400
]
CFN77_10920
Enzymes [BR:
balt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFN77_10920
Messenger RNA biogenesis [BR:
balt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CFN77_10920
DNA repair and recombination proteins [BR:
balt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFN77_10920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ATH72704
UniProt:
A0A653SHI2
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All DBs
Position
complement(2129247..2130755)
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AA seq
502 aa
AA seq
DB search
MDKLHQTLMRYFGYDAFKTGQEDIIRSVLQQKDTVAMLPTGGGKSLCYQIPGYLTDGLVL
IISPLLSLMEDQVERMKMRGEKRVAALNSTLSFQERRHIIRHLPSYKFLFVAPEALMSEV
LLEQLKAMHVGLFVVDEAHCISEWGHDFRPEYSKLGEWREALGNPVALALTATATKQTLK
DTVQTLRLEHPDVHIHSVNRPNIALLKEAHETKEAKEKRALELVETLQGPGLIYCPTRQM
TEDISRLVKQKTNQRVEFYHGGMESGDRMLIQQQFISGQIDLICCTSAFGMGIDKANIRF
VIHMSPPQSIEAFMQEIGRAGRDGKNSVSVLLYTEEDADIQSHLIQAEGFDDPEIDFFLA
RLSHMPINDEKKLREQLMEAGLQETRARMLSHYYTMYQTEQPRLLMKKLKEKLQDRQTEK
LKKVWQFKEHITGHRCFRQSLLSYFDEQLDLTEDASFGNCCSSCGLDLSDYEKKDQPLEL
NEMKHWKTELDRLFHLTKEAQH
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtggataagcttcatcagacgctgatgcgatactttggttatgatgccttcaaaacaggt
caggaggacattattcgaagtgtacttcaacaaaaagatacggttgccatgcttcctact
ggtggcgggaagtcactttgttatcaaattccgggctatttgacagatgggttagtgctg
atcatttcacctcttttatcactcatggaagatcaagtggaacgcatgaaaatgcgcggt
gaaaagcgagtggctgcgcttaacagtacactgtcttttcaagaaagaagacatattatt
cggcatttgccatcatataaatttttatttgtcgcacctgaggcgcttatgtcagaggta
ttgttagagcagctcaaagcgatgcatgtgggtctattcgttgtagatgaagctcactgt
atatcggaatggggacatgatttccgcccggaatactccaagcttggggaatggagggaa
gcgctcggcaatcctgtcgccttagcactaacggcaactgcaacgaaacaaaccttaaaa
gatactgtgcaaacattgcggctagagcatccagatgttcatattcattcagtcaaccgg
ccgaatattgcactattaaaagaggcgcatgaaacgaaagaagcaaaagagaaacgagca
ctggagcttgtggaaacccttcaagggcctgggctgatttattgtccgacccggcaaatg
acagaagatatttcacgtttggtgaaacaaaaaacgaatcaacgtgtagagttttatcat
ggcggaatggagtcaggagaccgcatgttgatccagcagcaatttatcagtggtcaaatt
gatctcatttgctgtacaagtgcttttggaatgggaattgataaagcaaatatacgcttt
gtgattcatatgagtccgcctcagtcaattgaagcatttatgcaggaaattggaagagct
ggacgggacgggaaaaatagtgtgagcgttcttttatatacagaagaggatgcggatatt
caaagtcatttgattcaagcagaaggttttgatgatccagaaattgattttttcttagcc
cgattatcacatatgccgataaatgatgaaaagaaattacgtgaacaattgatggaagca
ggtcttcaggagacgcgcgcgcgaatgctctcgcattattacacgatgtaccaaactgaa
cagccccgtttgctcatgaagaagctgaaagaaaagctgcaggatagacaaacagaaaag
ctaaaaaaagtgtggcagtttaaagagcatatcactggccatcgctgctttaggcaatct
ctgttatcatactttgatgagcagcttgatctaacggaggacgcttcctttgggaactgc
tgctcttcatgcggacttgacctgtctgattacgaaaaaaaagatcaaccattggagctg
aatgaaatgaaacactggaagaccgagctggatcgtctgtttcacctgacaaaagaggcg
cagcattga
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