Bacillus albus: QRY64_02645
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Entry
QRY64_02645 CDS
T09323
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
balu
Bacillus albus
Pathway
balu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
balu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QRY64_02645 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
balu03400
]
QRY64_02645 (mfd)
Enzymes [BR:
balu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QRY64_02645 (mfd)
DNA repair and recombination proteins [BR:
balu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
QRY64_02645 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
TRCF
DEAD
Helicase_C
CarD_TRCF_RID
ResIII
Cas3-like_C_2
MFD_D3
UB2H
RecG_dom3_C
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WJE70967
LinkDB
All DBs
Position
54147..57677
Genome browser
AA seq
1176 aa
AA seq
DB search
MIGLLEQFYKNEEIQSVINGLEDGLKEQLVSGMATSSRSLLMAALYKKTKKSQLIVTHNL
YQAQKVHEDLVALLGEKDVWLYPVNELIASELGVASPELKAQRIEVLNRLAAGENGIIVA
PVAGLRRFLPMKELWKQRQIEISLGQEIDLDTFLHTLHHIGYERKSMVEAPGEFSLRGGI
LDIYPLTEELPVRIEFFDTEVDSIRLFDVDEQRSQDKKESVRFGPATEFLFSQEELKSGI
KHLEEGLTKTMQKLSDDKLKTTVLETVSHEIEMLKNGQSIEQMFKYLSIFYNEPASLIDY
LPEDGVVILDEISRIQETASHLETEEAEWYISLLGEGTIIQDLSFSHSFEEFLHHKKRNF
VYLTLFLRHIAHTHPQNIVNVTCKTMQDFHGQMQLLKTEIDRWNEGHFTTVVLGTDDERV
KKLQHILSDYDIEADIVEGTDILLPGRLQIAVGDLHAGFEMPMQKLVVITEKELFHKKVK
KSQRKQKLSNAERIKSYSELKVGDYVVHVNHGIGKFLGIETLEINGVHKDYLNIKYQGND
KLYVPIEQIDQVQKYVGSEGKDPKVYKLGGNDWKKVKTKVEKSVQDIADDLIKLYAEREA
SKGYAYTPDTAEQQEFESSFPYQETEDQLRSIEEIKKDMERGRPMDRLLCGDVGYGKTEV
AIRAAFKAIMDEKQVAILVPTTILAQQHYETIRERFQDYPINIGLLSRFRTRKQQNETIK
GLKDGTVDIVIGTHRILSKDVTYKDLGLLIIDEEQRFGVTHKEKIKQLKANVDVLTLTAT
PIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNPALMREAIERELARGGQVYFLYN
RVEDIERKAEEISMLVPDARVTYAHGKMNESELESVMLSFLEGQHDVLVSTTIIETGVDI
PNVNTLIVFDADRMGLSQLYQLRGRVGRSNRVAYAYFAYKRDKVLSEVAEKRLQAIKEFT
ELGSGFKIAMRDLSIRGAGNLLGAEQHGFIDSVGFDLYSQMLKDAIEQRRGTDGVENTVN
VEIDLEVDAYLPDAYISDSKQKIMMYKQFRGVSAIEDIEELQEEMIDRFGDYPQEVGYLL
QIANIKVLAMKEQIELIKQNKFEVTILFSEQASQNIDGGKLFMLGNSFGRMIGLGMEGSQ
LKIVMKTNGLETSKWLTIAENLLKGLPEVKKEVINA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgataggtttattagagcaattttataaaaatgaagagatccaatcggttattaatgga
ttagaagatggtttaaaagaacaacttgtatcaggtatggcaacctcttctcgttcgtta
ttaatggcggccttatataaaaaaacaaaaaaatcacaacttattgtgacgcataattta
tatcaagcacaaaaagtacatgaagatttagtggcgttacttggtgaaaaagatgtgtgg
ctatacccagtaaatgaattgatagcatcagagcttggtgttgcaagcccagaattgaag
gcgcaacgcattgaagtattaaatcgtttagctgcaggagagaatgggattattgtagca
ccagttgcggggttacgcagatttttaccaatgaaagaattgtggaagcaaaggcaaatc
gaaatcagtctagggcaagagattgatttagatacattcttgcatactttacatcatatt
ggctatgaacgtaagtcgatggtagaagctcctggggaatttagtttgcgcggggggata
ttagatatttatccactaaccgaagagttgccagttcgtattgaattcttcgacacagaa
gtcgattctattcgattatttgatgtggatgaacagcgctctcaagataaaaaagaaagt
gttagatttggtccagcaacggagtttttattttcacaggaagaattgaaatcgggaatt
aagcatcttgaggaaggcttaactaagacgatgcaaaaactttccgatgataaattgaag
actacagtgcttgaaacggtaagtcatgaaattgagatgttaaaaaacgggcaaagtata
gaacagatgtttaaatatttatctattttctataacgaacctgctagtctgatagattat
ttaccagaagatggtgttgtaattttagatgagatttcccgtattcaagaaacagcatca
catcttgaaacggaagaagcggaatggtatatatcacttcttggtgagggaacgattatt
caagatttatctttctcccattcgtttgaagaatttcttcatcataaaaaaagaaacttt
gtatatttaacgttattcttacgtcatatagcacatacacatccgcaaaacattgtgaat
gtaacatgtaaaacgatgcaagatttccatgggcagatgcagttgttgaaaactgaaatt
gatagatggaacgaagggcattttacgacggttgtgctcggcacagatgatgaacgtgta
aaaaaactacaacatattttaagtgattatgatattgaggcagatattgtagagggcaca
gatatattattgcctggaaggttacaaattgctgtaggtgatttacatgcaggatttgaa
atgccgatgcaaaaacttgttgtcattactgaaaaagagctttttcataagaaagttaaa
aaatcacaacgtaagcaaaagttatctaatgctgaacgtattaaaagttattcggaatta
aaagttggggattatgtagtccatgtaaatcatggtataggtaaatttttaggtatcgag
acattagagattaatggtgttcataaagattatttaaatattaaataccaaggcaatgat
aagttatacgttccaattgaacaaattgatcaagtgcaaaaatatgtaggatctgaagga
aaggatccgaaagtttataaattgggcggaaatgattggaagaaggtcaaaacgaaggtt
gaaaaatctgtacaagatattgcggatgacctaattaaactatatgctgagcgcgaagct
tcaaagggttatgcatatacgccagatacggcagaacaacaagaatttgagtcttctttc
ccgtatcaagagacagaggatcaattacgttctattgaagagattaaaaaggatatggaa
cgtggacgtccaatggataggcttctttgtggtgatgtaggatatggcaagacggaagtg
gctattcgtgcggcgtttaaggcaattatggatgaaaaacaagttgcaattttagtgccg
acgacgatccttgcacaacaacactatgaaacaattcgagagcgttttcaagattatcca
atcaatataggattgttaagtagattccgtacgagaaaacagcaaaatgaaacgattaag
ggcttaaaagatggcacggtagatattgtaatcggaacgcatcgtattttatctaaagat
gttacttataaagatttaggtcttcttattattgatgaagaacaaagatttggtgtaacg
cataaagaaaaaattaaacaattaaaagcgaatgttgacgtattaacattaacggcaact
ccgatcccacgtacgctccatatgtctatgcttggtgtgcgtgatttatctgttattgag
acaccgccggaaaatcgtttcccagttcaaacgtatgtagtagagtataatccagcatta
atgcgagaagcgatagaacgagagctcgcaagaggtggtcaagtttacttcctatacaat
cgtgtagaggatattgaacgaaaagcagaggaaatttcgatgttagttccagatgcgcgc
gtaacgtatgcacatgggaaaatgaatgagagtgaattagagtctgttatgctatcgttt
ttagaagggcagcatgatgttcttgtaagtacaacgattattgagacgggtgtagatatt
ccgaatgtaaatacgttaattgtatttgatgcagatcgtatgggattatcgcagttgtat
cagcttcgtggacgtgttggacgttctaaccgtgttgcgtatgcatactttgcatacaaa
cgagataaagtgttatcggaagttgcggagaagcgtctgcaagccattaaagagttcaca
gagctaggatctggtttcaaaattgcaatgcgagacttatcaattcgtggtgcaggtaac
ttattaggggccgaacaacatggatttattgattctgtcggatttgatttgtattctcaa
atgttaaaagatgcaattgaacaacgcagaggaacagacggagttgaaaataccgttaat
gttgaaattgatttagaagtcgatgcatatttaccagatgcttatatttcagatagtaaa
caaaaaattatgatgtataaacaatttagaggtgtttctgcaattgaggatattgaagag
ttgcaggaagagatgatagatagatttggtgattacccgcaagaagttggttacttattg
caaattgcaaatattaaagtattggcaatgaaagaacaaattgaattaattaagcaaaat
aaatttgaagtaacaattctgttttcagaacaagcgagtcaaaatattgatggcggaaaa
ttattcatgctcggaaatagttttgggcgtatgatcggtctaggaatggaaggatcacaa
ttgaaaatcgtcatgaaaacaaatggcttagagacatcgaagtggttaacaattgctgaa
aatttattaaaaggcttgccagaagtaaaaaaagaagtcataaatgcctaa
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