Burkholderia ambifaria AMMD: Bamb_0451
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Entry
Bamb_0451 CDS
T00398
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam00061
Fatty acid biosynthesis
bam00071
Fatty acid degradation
bam01100
Metabolic pathways
bam01212
Fatty acid metabolism
bam02024
Quorum sensing
bam04146
Peroxisome
Module
bam_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Bamb_0451
00071 Fatty acid degradation
Bamb_0451
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Bamb_0451
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bamb_0451
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bam01004
]
Bamb_0451
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bam04147
]
Bamb_0451
Enzymes [BR:
bam01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Bamb_0451
Lipid biosynthesis proteins [BR:
bam01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Bamb_0451
Exosome [BR:
bam04147
]
Exosomal proteins
Exosomal proteins of breast milk
Bamb_0451
Exosomal proteins of breast cancer cells
Bamb_0451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABI86010
UniProt:
Q0BIL3
LinkDB
All DBs
Position
1:510331..512004
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AA seq
557 aa
AA seq
DB search
MEKIWLKSYPPGVPAEIDASPYPSIPDLLDESFKQYRNRKAFVCMGKSITYGELDALSRQ
FGAWLQSRGLARGARVALMMPNVLQYPVAIVAVLRAGYTVVNVNPLYTPRELEHQLKDSG
AEAIVILENFASTLQAVIANTAVKHVVVASMGDLLGIKGWVVNYVVRNVKKMVPAWQLPS
FTRFKAALSEGARQTFKPQKLGPDDVAFLQYTGGTTGVAKGATLLHRNIVSNVLQAGAWH
HPAHEKYPDVKQFVTVVALPLYHVFALTVCGFLTMRTGGMGILIPNPRDIGGMIKELKGY
QISTIPAVNTLYNALLNHPEFNQLDLSKLAIANGGGMAIQESVAKRWYEKTHTAIVEGYG
LSETSPVATCNPVTATEYSGTIGLPLPSTEVAIRDDAGADVPLGEPGEICIRGPQVMAGY
WNRPDETEKVMFPDGFFKTGDVGVMDARGYVKIVDRKKDMILVSGFNVYPNEVEDVVASH
PGVFEVAAVGVPDEHSGEAVKLFVVKKDPTLTDKDILAYCKERLTGYKRPKLVEFRTELP
KTNVGKILRRELRDGRA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatttggctgaaatcatacccacccggcgttccagccgaaattgacgcgtcc
ccatacccctccattccggatctcctcgacgaaagcttcaagcagtatcgcaaccgcaag
gcgttcgtctgcatgggcaagagcatcacgtacggcgagctcgatgcgctgtcgcgccag
ttcggcgcatggctgcagtcgcgcggtctggcgcgcggcgcgcgcgtggcgctgatgatg
ccgaacgtgctgcagtatcccgtggcgatcgtcgcggtgctgcgcgcgggctacaccgtc
gtcaacgtcaacccgctctatacgccgcgcgagctcgaacatcagctgaaggacagcggg
gcggaggcgatcgtcatcctcgagaacttcgcgtcgacgttgcaggccgtcattgcgaat
acggcggtcaagcatgtcgtggtcgcgtcgatgggcgacctgctgggcatcaagggctgg
gtggtcaattacgtcgtgcgcaacgtgaagaagatggtgccggcctggcagcttccgtcg
tttacgcgcttcaaggccgcgctgtcggaaggcgcgcgccagaccttcaagccgcagaag
ctcggccccgacgacgtcgcgttcctccagtacacgggcggcacgacgggtgtcgcgaag
ggcgcgacgctgctgcaccggaacatcgtgtcgaacgtgctgcaggccggcgcgtggcac
catccggcgcacgagaagtaccccgacgtgaagcagttcgtgacggtcgtcgcgctgccg
ctctatcacgtgtttgcgctgacggtctgcgggttcctgacgatgcgcacgggcggtatg
ggtatcctgattccgaacccgcgcgacatcggcggcatgatcaaggagctgaagggttac
cagatctcgacgatcccggccgtcaacacgctgtacaacgcgctgctgaaccatcccgaa
ttcaaccagctcgacctgtcgaagctcgcgatcgccaacggcggcggcatggcgatccag
gaaagcgtcgcgaagcgctggtatgagaagacccatacggcgatcgtcgaagggtatggc
ctgtccgaaacgtcgccggtcgccacctgcaatcccgtgacggcgaccgagtacagcggg
acgatcggcttgccgctgccgtcgaccgaggttgccatccgcgacgatgccggcgcggac
gtcccgctcggcgagccgggtgagatctgcatccgcggaccgcaggtcatggccggctac
tggaaccgtccggatgaaaccgagaaggtcatgttcccggacggtttcttcaagaccggg
gacgtcggcgtgatggacgcgcgcggttacgtgaagatcgtcgaccggaagaaggacatg
atcctggtatccggcttcaacgtgtatccgaacgaggtcgaggacgtggtggcgtcccac
ccgggcgtgttcgaggtggcggcggtcggcgtgccggacgagcactcgggcgaagccgtg
aagctgttcgtcgtgaagaaggatccgacactgaccgacaaggacatcctcgcgtactgc
aaggagcggctcaccggctacaagcggccgaaactcgtcgagttccgcacggagctgccg
aagacgaacgtcggcaagatcctgcggcgcgaattgcgcgacggacgcgcgtaa
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