Burkholderia ambifaria AMMD: Bamb_0683
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Entry
Bamb_0683 CDS
T00398
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam00260
Glycine, serine and threonine metabolism
bam00460
Cyanoamino acid metabolism
bam00630
Glyoxylate and dicarboxylate metabolism
bam00670
One carbon pool by folate
bam00680
Methane metabolism
bam01100
Metabolic pathways
bam01110
Biosynthesis of secondary metabolites
bam01120
Microbial metabolism in diverse environments
bam01200
Carbon metabolism
bam01230
Biosynthesis of amino acids
bam01240
Biosynthesis of cofactors
bam04981
Folate transport and metabolism
Module
bam_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bamb_0683
09102 Energy metabolism
00680 Methane metabolism
Bamb_0683
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bamb_0683
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Bamb_0683
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Bamb_0683
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Bamb_0683
Enzymes [BR:
bam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Bamb_0683
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ABI86242
UniProt:
Q0BHY1
LinkDB
All DBs
Position
1:762817..764112
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AA seq
431 aa
AA seq
DB search
MYSAAPVNLYTLNGNRMFDRAQSTIANVDPELFAAIEQENRRQEDHIELIASENYTSPAV
MAAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQ
GVFFAMLKPGDTIMGMSLAHGGHLTHGSPVNMSGKWFNVVSYGLNEQEDIDYDAAEQLAQ
EHKPKLIVAGASAFALKIDFERLAKIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFV
TTTTHKSLRGPRGGVILMKSEYEKPINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKA
YQEKVVENARVLAETLVKRGLRIVSGRTESHVMLVDLRAKNITGKAAEAALGAAHITVNK
NAIPNDPEKPFVTSGIRLGSPAMTTRGFGPAEAELVGNLIADVLENPEDAATIERVRTQV
AELTKRFPVYR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtactcggccgcaccggtcaacctgtacacacttaacggaaaccgtatgtttgacaga
gcccaaagcaccatcgcgaacgtcgatcccgaactctttgctgcgatcgagcaggaaaac
cgccgccaggaagatcacatcgagctgatcgcgtcggaaaactacacgagcccggccgtg
atggccgcccagggctcgcagctcacgaacaagtacgcggaaggttatccgggcaagcgc
tactacggcggctgtgaatacgtcgatgtggtcgagcagctggcgatcgaccgtgtgaag
cagctgttcggcgcggaagccgcgaacgtgcagccgaactcgggttcgcaggcgaaccag
ggcgtgttcttcgcgatgctcaagccgggcgacacgatcatgggcatgagcctcgcgcac
ggtggtcacctgacgcacggctcgccggtgaacatgtcgggcaagtggttcaacgtggtg
agctacggtctgaacgagcaggaagacatcgactacgacgcggccgagcagctcgcgcag
gaacacaagccgaagctgatcgtcgcgggtgcatcggcgttcgcgctgaagatcgacttc
gagcgtctggcgaagatcgcgaagtcggtcggtgcatacctgatggtcgacatggcgcac
tacgcgggcctgatcgcggcgggcgtgtatccgaacccggtgccgcacgccgacttcgtg
acgacgacgacgcacaagagcctgcgcggcccgcgcggtggcgtgatcctgatgaagtcg
gaatacgagaagccgatcaactcggcgatcttcccgggcatccagggtggcccgctgatg
cacgtgatcgcggcgaaggccgtggcgttcaaggaagcgctgtcgccggaattcaaggcg
taccaggaaaaggtggtcgagaacgcgcgcgtgctggctgaaacgctggtcaagcgcggc
ctgcggatcgtgtcgggccgcaccgaaagccacgtgatgctggtggacctgcgcgcgaag
aacatcacgggcaaggcagcggaagcagcgctcggtgccgcgcacatcacggtgaacaag
aacgcgatcccgaacgatccggagaagccgttcgtgacgagcggcatccgtctgggttcg
ccggcgatgacgacgcgcggctttggcccggcggaagcggaactggtcggcaacctgatc
gccgacgtgctcgagaatccggaagatgcagcgacgatcgagcgcgtgcgcacgcaagtg
gccgagctgaccaagcgtttcccggtctatcgctga
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