Burkholderia ambifaria AMMD: Bamb_0866
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Entry
Bamb_0866 CDS
T00398
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam03030
DNA replication
bam03430
Mismatch repair
bam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bamb_0866
03430 Mismatch repair
Bamb_0866
03440 Homologous recombination
Bamb_0866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bam03032
]
Bamb_0866
03400 DNA repair and recombination proteins [BR:
bam03400
]
Bamb_0866
Enzymes [BR:
bam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bamb_0866
DNA replication proteins [BR:
bam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bamb_0866
DNA repair and recombination proteins [BR:
bam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bamb_0866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ABI86425
UniProt:
Q0BHE8
LinkDB
All DBs
Position
1:951312..952439
Genome browser
AA seq
375 aa
AA seq
DB search
MSDSCPSDPACEQPLVFVDLETTGGSSAEHRITEIGVVEIGPLGVSTWTTLVNPGQSIPP
FIQQLTGISDDMVRDAPSFASLAPTLFERLDGKLFVAHNASFDRGFLRAEFERAGIAFNP
DVLCTVRLSRALFPREARHGLDALIERHGLVPAARHRALADADLLWQFWRQLHEIVPLER
LRDQIARTTRHFRLAGGMTEAWLDTAPAGCGVYALFGEGDEALYVGRSVRVRQRLRALLT
GERRSSKEMRLAQQVRRVEWRETGNELGAMLAEAQWIARLRPSHNRRPAADKARAGNAGW
PFDGAVAFEAGDERRLFHVIDGWRYLGAAESLDAAMRLAADGLDGAYEPHTHRLLQTHLA
RGLQLIPLAALTPAD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcctgtccgtccgatcccgcctgcgagcagccgctcgtcttcgtcgacctt
gaaaccaccggcggctcgtccgccgagcaccgcatcaccgaaatcggcgtggtcgaaatc
ggcccgctcggtgtgtcgacgtggacgacgctggtcaacccgggacagtcgattccgccg
ttcatccagcaactgaccggcatttcggacgacatggtgcgcgacgcgccgtcgttcgcg
tcgctcgcgcccacgctgttcgagcggctcgacggcaagctgttcgtcgcgcacaacgcg
agcttcgaccgcggcttcctccgcgccgaattcgaacgtgccggcatcgcgttcaatccg
gacgtgctgtgtacggtgcggctgtcgcgcgcgctgtttccgcgcgaggcgcgccacgga
ctcgacgctttgatcgagcggcatggcctcgtccccgcggcccgccaccgggcgctcgcg
gatgccgatctcctttggcagttctggcggcagttgcacgagatcgtgccgctcgagcgt
ctgcgcgaccagattgcgcgtacgacgcgccatttccgtctcgcgggcggcatgaccgaa
gcgtggcttgataccgcgcccgccggatgcggcgtgtacgcgctattcggggagggcgac
gaagccctttacgtcgggcgcagtgtgcgggtgcggcagcgcttgcgcgcgttgctgacc
ggcgagcggcgctcgtcgaaggagatgcggctcgcgcagcaggtgcggcgggtcgaatgg
cgggaaaccggcaacgagctgggcgcgatgctcgccgaagcgcagtggatcgcccgcctg
cgtccgtcgcacaaccggcgtcccgcggccgacaaagcccgtgcgggcaacgcgggctgg
ccgttcgacggcgcggtcgcattcgaagccggcgacgagcgccgcctgtttcacgtgatc
gacgggtggcgctatctcggggcggccgaatcactcgacgcggccatgcggctcgcggcc
gacggcctggacggtgcgtacgaaccccatacccatcgcctgctgcagactcatctcgcg
cgcggcctgcaactgattccgctcgcggcgctcacgccagccgactga
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