Burkholderia ambifaria AMMD: Bamb_0988
Help
Entry
Bamb_0988 CDS
T00398
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
bam
Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bam03009
]
Bamb_0988
Enzymes [BR:
bam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Bamb_0988
Ribosome biogenesis [BR:
bam03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Bamb_0988
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABI86547
UniProt:
Q0BH26
LinkDB
All DBs
Position
1:1079542..1080546
Genome browser
AA seq
334 aa
AA seq
DB search
MNELGKISQNSVASGQVSMLEIDENSAGQRIDNFLLRVCKGVPKSHIYRILRSGEVRVNK
GRVDAQYRLAFGDIVRVPPVRVAAADLARADTPIVPPAQFEVLYEDDAMLVINKPAGVAV
HGGSGVAFGVIEQMRQARPRAKFLELVHRLDRETSGILMLAKKRTALVGLHEQIRENRMD
KRYFACGHGEWQSDWGRRRAVKAPLFKYSTAEGERRVRVQDDGLPSHTVFNLLERWPDYA
LVEAELKTGRTHQIRVHLAHLGLPIAGDAKYGDFALNKALARANAQPSLKRMFLHAHRLK
LAHPLTGEPLQFDAPLPDECRRFLDQLSALRDNA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagttaggcaaaatatcccagaattcagtcgcaagcggccaggtatcgatgctc
gagatcgacgaaaactcggccggtcagcggatcgacaacttcctgttgcgcgtctgcaaa
ggcgtgcccaaaagccatatttaccggatcctgcgcagcggcgaagtgcgcgtgaataag
ggtcgggtcgatgcccagtaccgcctcgcgttcggcgacatcgtccgcgtgccgcccgtg
cgggtggcggcggccgatctagcgcgcgccgacacgccgatcgtgccgcccgcgcagttc
gaggtgctgtacgaagacgatgcgatgctcgtcatcaacaagccggccggcgtcgcggtg
cacggcggcagcggcgtcgcgttcggcgtgatcgagcagatgcgccaggcgcgtccgcgc
gcgaaattcctcgaactcgtgcaccggctcgaccgcgagacgtccgggatcctgatgctc
gcgaagaagcgcacggcgctcgtcggcctgcacgagcagatccgcgaaaaccggatggac
aagcgttacttcgcgtgcggacacggcgagtggcagtccgactggggccgccgccgcgcg
gtgaaggcgccgctgttcaagtattcgaccgcggaaggggagcggcgcgtgcgcgtgcag
gacgacggcctgccgtcgcacacggtgttcaacctgctcgagcgctggccggattacgcg
ctggtcgaagcggaactcaaaacgggccggacccatcagatccgtgtgcacctcgcgcat
ctcggcctgccgatcgccggcgacgccaagtatggcgatttcgcactgaacaaggcgctg
gcgcgcgcgaacgcgcagccgtcgctgaaacggatgttcctgcatgcgcaccggctgaag
ctcgcgcacccgctgaccggcgagccgctgcagttcgacgcgccgctgccggacgagtgc
cggcgcttcctcgatcaactcagcgctttgcgcgataacgcatga
DBGET
integrated database retrieval system
