Burkholderia ambifaria AMMD: Bamb_1097
Help
Entry
Bamb_1097 CDS
T00398
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Bamb_1097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bam03400
]
Bamb_1097
Enzymes [BR:
bam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Bamb_1097
DNA repair and recombination proteins [BR:
bam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bamb_1097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABI86656
UniProt:
Q0BGR7
LinkDB
All DBs
Position
1:1199767..1203105
Genome browser
AA seq
1112 aa
AA seq
DB search
MLHLFYSNRHETLADALLDDLAAFPARNGPWAPQQVIVPSAALRRRLELDIAARHGVCAN
VEFTYLAQWLWAQIGRVLTVPARSPFAPDRLVWRCYRLFAQAAGDAPWLASPRLAAYLSA
SDDAMRYELAQRVAAVLDHYLTYRPEWLAAWQAGESVLAGDAAPRGISDAARDDEHWQAA
LWRALLAELSDSGTPPAHRFLVEARNLDAETVARADWPESVSVFALPTMPPLHVALLREL
SRWIDVRVYALNPCREFWFDIVTAAHAEALDAAGRLDYQQVGHPLLAEWGRQTQAQLHML
HELTESAALGDASHFVGNPAPTWLARVQNAILDLQPEAELGEAPAERGIEVHVCHSLARQ
LEVLHDRLLAWFDADATLQPSDVLVAVADLAAAGPLIDAVFGTAGAGGARVPYRITGLPP
SQANPVARVLLEWLALPERQVGAPELVEWLRVDAVAARYGIDAAALETVQTWLAAAGARR
GLSPTASDDAAVPAPRHTFSDALARLFLGYAMPEGAAPVGAWLPIEAATGSEAELLGRLA
RFTDDLDGFSRRLASAHTPRAWSELFADTLARFFDSGAAYADALAGVRDALDAMLAAMTE
GAPDEALPAAVVRAGLTAALDDPARGGVPWGGVTFSSLTSLRGLPYRVVCLLGMDDGVLP
SLARADEFDLMAVLPKLGDRQRRDDERNLFLDLLLAARDRLLIAYTGRSIRDNAPLPPAA
LVDELLDHLALVTAGADTAPGAVDAARRAFIVEHPLQPFAAEYFRPGSELASYDAERATL
ASLLAAEAARDATREQPFFAQPLPAELVEPVAFNEFERFWRHPARALLRARLGIVLSDAQ
AELLDTEPFALDFAGSDALAERVLPLLIESDEGGVHDHALRIADASPELPGGATGAVWRD
QALGSMMQLASNVRRALADGMERRPFTLAIAPAWPDTDQALFGADDAMLSGDALSAPLEL
HGTLNRLTPAGQIIYRYARPSARDYLSAWLAHLVYCAVEPDGPRRTLWFGSGGAFELTPV
AAPLERLAPLAALFRAGRRMPLRFFPRSAWARVSDGEAKAASVWINERVVSEADDPAIAI
AWRGAHPSLDEPFGTLARIVFEPMLEHLKEIA
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctcttttattcgaaccgtcacgaaacgctcgccgacgcactgctcgacgac
ctcgccgcgttcccggcccgcaacggcccgtgggcgccgcagcaggtcatcgtgccgagc
gcggcgctgcgccgccggctcgagctcgacatcgccgcgcgccacggcgtgtgcgcgaac
gtcgagttcacgtatctcgcgcaatggctgtgggcgcagatcggccgcgtgctgacggtg
cccgcgcgttcgccgttcgcacccgaccgcctcgtgtggcgctgctaccggttgttcgcg
caggccgcgggcgatgcgccgtggctcgcgtcgccgcggctggccgcgtatctgtccgcg
tccgacgacgcgatgcgctacgagctggcgcagcgcgtcgcggccgtgctcgatcattac
ctgacctatcggcccgaatggctggccgcgtggcaggccggcgagtcggtgctcgcgggc
gacgccgcgccgcgcgggatcagcgatgccgcacgcgacgacgagcactggcaggccgcg
ctgtggcgcgcgctgctcgccgagctgagcgacagcggcacgccgcccgcgcatcggttc
ctcgtggaggcgcgcaacctcgatgccgaaaccgtcgcgcgcgccgactggccggaatcg
gtcagcgtcttcgcgctgccgacgatgccgccgctgcacgtcgcgctactgcgcgagctg
tcgcgctggatcgacgtgcgcgtctatgcgctcaacccgtgccgcgaattctggttcgac
atcgtcaccgccgcgcatgccgaggcgctcgatgcggccggccggctcgactaccagcaa
gtcggccatccgttgctcgcggagtggggccggcagacgcaggcgcaactgcacatgctg
cacgaactgaccgaaagcgccgcgttgggcgacgcgtcgcacttcgtcggcaatcccgcg
ccgacctggctcgcgcgcgtgcagaacgcgatcctcgacctgcagccggaagccgaactc
ggcgaagcgccggccgagcgcgggatcgaggtgcacgtgtgccacagtctcgcgcgtcag
ctcgaggtgctgcatgaccgcctgctcgcgtggttcgacgccgacgcgacgctgcagccg
tccgatgtgctggtggcggtcgccgatctcgcggcggcggggccgctgatcgatgcggtg
ttcggcacggcgggcgccggcggcgcgcgcgtgccttaccggatcaccggcctgccgccg
tcgcaggcgaacccggtcgcgcgcgtgctgctcgaatggctcgcgttgccggagcggcag
gtcggcgcgccggagctggtcgaatggctgcgcgtcgacgcggtcgcggcccgttacggc
atcgacgccgccgcgctcgagacggtgcagacctggctcgcggccgccggcgcgcggcgc
gggctgtcgccgacggcgagcgacgatgcggcggtgccggcgccgcgccatacgttctcc
gatgcgctcgcgcggctcttcctcggctatgcgatgcccgaaggcgcggcacccgtcggc
gcgtggctgccgatcgaggcggccaccggcagcgaggccgaactgctcggccggctcgcg
cgctttaccgacgatctcgacggcttttcacggcggctcgccagcgcgcatacgccgcgc
gcatggagcgaactgttcgccgacaccctcgcgcggttcttcgactccggcgccgcgtat
gccgatgcgctcgcaggtgtgcgcgacgcgctcgacgcgatgctcgccgcgatgacggaa
ggcgcgcccgacgaggcgttgcccgcggccgtcgtgcgcgcggggctgacggccgcgctc
gacgatccggcgcgcggcggggtgccgtggggcggtgtcacgttctcgtcgctgacgagc
ttgcgcggcttgccgtaccgcgtcgtgtgcctgctcggcatggacgacggcgtgctgccg
agcctcgcgcgcgcggacgagttcgacctgatggccgtcctgccgaagctcggcgaccgc
cagcgccgcgacgacgagcgcaacctgtttctcgacctgctgctcgccgcgcgcgaccgg
ctgctgatcgcctatacggggcgaagcattcgcgacaacgcgccgttgccgcccgcggcg
ctcgtcgacgaactgctcgaccatctcgcgctcgtcacggccggcgcggacaccgcgccg
ggcgcggtcgatgccgcgcggcgcgcgttcatcgtcgagcatccgctgcaaccgttcgcg
gccgagtatttccggcccggcagcgaactggcgtcgtacgacgccgagcgcgcgacgctc
gcgtcgctgctggcggccgaagccgcgcgcgacgcgacgcgcgagcagccgttcttcgcg
cagccgctgccggccgagctggtcgagcccgttgcattcaacgaattcgaacgtttctgg
cggcatccggcgcgcgcgctgctgcgtgcgcggctcggcatcgtgttgtccgacgcgcag
gccgaactgctcgacacggagccgttcgcactcgacttcgccggcagcgacgcgctcgcc
gagcgcgtgctgccgctcctgatcgaatcggatgaaggcggcgtgcacgatcatgcgctg
cgcatcgcggacgccagccccgaactgccgggcggcgcgacgggtgccgtctggcgcgac
caggcgctcggctcgatgatgcagcttgcgtcgaacgtgcgccgtgcgctggccgacggc
atggagcgacggccgttcacgctcgcgatcgcgcccgcatggcccgacaccgaccaggca
ctgttcggtgccgatgacgcgatgctgtcgggcgacgcgctgagtgcgccgctcgaattg
cacggcacgctgaaccggctgacgccggcgggccagatcatctatcgctatgcgcggccg
agcgcgcgcgactacctgtccgcgtggcttgcgcacctcgtctattgcgcggtggagccc
gacggcccgcgccgcacgctgtggttcggcagcggcggcgcgttcgaactcacgccggtc
gctgcaccgctcgagcggctcgcgccgctcgccgcgctgtttcgcgcggggcggcgcatg
ccgctgcgatttttcccgcgcagcgcatgggcgcgcgtttccgacggcgaggcgaaggcc
gcgagcgtctggatcaatgagcgcgtggtgagcgaagccgacgatccggccatcgcgatc
gcgtggcgcggcgcccatccgtcgctcgacgagccgttcggcacacttgcgcggatcgtg
ttcgagccgatgctggaacatctgaaggagatcgcatga
DBGET
integrated database retrieval system
