Burkholderia ambifaria AMMD: Bamb_1206
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Entry
Bamb_1206 CDS
T00398
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam03030
DNA replication
bam03430
Mismatch repair
bam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bamb_1206
03430 Mismatch repair
Bamb_1206
03440 Homologous recombination
Bamb_1206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bam03032
]
Bamb_1206
03400 DNA repair and recombination proteins [BR:
bam03400
]
Bamb_1206
Enzymes [BR:
bam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bamb_1206
DNA replication proteins [BR:
bam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bamb_1206
DNA repair and recombination proteins [BR:
bam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bamb_1206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ABI86764
UniProt:
Q0BGF9
LinkDB
All DBs
Position
1:complement(1321836..1322666)
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AA seq
276 aa
AA seq
DB search
MRRNGRDHARMRKALEDLHMKVAIIDTETTGVAAHDEPISIGILLVEIEPGSGVLVQEIG
RYHGLREPCVPIHPKAQAVHGMTAADLSGKVLDLAWITSLINEADVLIAHNAQFDARMLA
VVCDAGSAKSWRCSLQQFPWPAAVGRKKLDSVCEFYGVVKQLRHDALGDCQALLAVLLIH
TGKTTRSRTYLALLLAKAPVVLDAAPQAAMGRSPAYQQPPAYRMLEPRQPVRSAWDQDPV
EYKRPQRRRQSLSVAEIMVWAVVLLIAMFVGLAAHG
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcagaaacggacgtgatcatgcgcgaatgcgaaaggcgcttgaggacttgcacatg
aaagtagcgatcatcgataccgaaacaactggggttgcggcgcacgacgagccgatcagt
ataggaatcctgcttgttgaaatcgaaccaggttcaggcgttctcgttcaggaaattggc
cgataccacggcttgcgcgagccatgtgtgccgatccatccgaaggctcaggcggtacac
ggcatgactgccgccgatctttctggaaaggtgcttgacctcgcctggatcacgtcactg
atcaacgaggcagatgtgctgatcgcgcacaatgctcagttcgacgcaaggatgctggcg
gtcgtctgcgacgctggatcagcaaagtcgtggcgctgttcactccagcagtttccgtgg
cccgctgccgtcggcaggaagaagctcgattcggtctgcgagttctatggcgtggtcaag
cagctccgtcatgacgcgcttggcgattgccaagccttgcttgcggtacttctaatccac
acagggaaaaccacgcgaagccgaacgtatctcgcgctgctcctggcaaaggcgcctgtc
gtgttagacgccgcgccgcaagccgccatgggccgatctccagcataccagcaaccgccc
gcgtatcgtatgcttgaaccgcgtcagccggtcaggtccgcgtgggaccaagacccggtc
gaatacaagcggccacaacggcggcggcagtctctgtctgtggccgagatcatggtgtgg
gctgttgtcttgttgatcgctatgtttgtcggccttgctgctcatgggtga
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