Burkholderia ambifaria AMMD: Bamb_1322
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Entry
Bamb_1322 CDS
T00398
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam03420
Nucleotide excision repair
bam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bamb_1322
03430 Mismatch repair
Bamb_1322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bam03400
]
Bamb_1322
Enzymes [BR:
bam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bamb_1322
DNA repair and recombination proteins [BR:
bam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bamb_1322
MMR (mismatch excision repair)
Other MMR factors
Bamb_1322
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_11
DUF8203
Motif
Other DBs
NCBI-ProteinID:
ABI86880
UniProt:
Q0BG43
LinkDB
All DBs
Position
1:1452257..1454779
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AA seq
840 aa
AA seq
DB search
MDAHRPAIAGSAPARRAALTAPRRREAERIGNGIAPPTYNVGSAFFSHARCRSMPDLLAN
LNPEQYAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGYASPPTVLAVTFTNKAARE
MMARLSAMMPIDTRGMWIGTFHGLCNRMLRTHWRDAGLPQTFQILDTADQLSAIKRLMKA
ANVDDEKYPPKNVQYFINNAKEQGLRPDKVDATDNFNRKFVELYQAYDQQCQREGVVDFP
ELLLRCYELLAYNAPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAGGENAIFAVGDDD
QSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANQLISNNAHRLGKNLRT
DAGHGEPVRVYEASTDAQEAGWIVEEIRSLINTGMSRSEVAVLYRSNAQSRAIEHTLMTS
GIPYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFVRVVNFPTRGIGARSIEQLADAA
RLYDCSMAAAIPYVTGKAGTSLGGFATLIAKMRAETQQMSLPETVEYVVRASGLADFYQG
EREGQDRLENLQELVNAATAFVSEEGYGLDAPARSIPLRAGAIAAPELGVDANDPSVDVL
DPAPLDDPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLEFSAVFIT
GLEEGLFPHENSVLESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRYNVRSRFF
DELPEHVLKWLTPKVEAGARWGGRSDNAGWGRDWFSRPGGGSREQVVDAAVSAPLPAFAN
KQRAADTGFRVGQQVFHTKFGEGTVTALEGNGADAKAQVKFKRHGEKWLALAVAKLQAVE
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggatgcacatcggccagccattgcggggtccgcgccggcccgtcgggcggccctcact
gcgccgcggcggcgcgaggccgaacggatcggaaacggcatcgcgccgccgacttataat
gtcgggtccgcatttttctcgcacgcccgctgccgctccatgcccgatctgctcgccaat
ctgaaccctgaacaatacgccgccgtcacgttgccgaacgaaccggcgctgatcctcgcg
ggggcgggcagcggcaagacccgcgtgctgatcacccgcatcgcgtggctgatccagcaa
ggctacgcgtcgccgcccaccgtgctggccgtcaccttcacgaacaaggccgcgcgcgag
atgatggcgcgcctgtcggcgatgatgccgatcgacacgcgcggaatgtggatcggcacg
ttccacgggctgtgcaaccggatgctgcgcacccactggcgcgacgccggcctgccgcag
accttccagatcctcgacacggccgatcagttgtcggcgatcaagcggttgatgaaggcg
gcgaacgtcgacgacgagaagtacccgccgaagaatgtccagtacttcatcaacaacgcg
aaggagcaggggctgcgtcccgacaaggtcgacgcgaccgacaacttcaaccgcaagttc
gtcgagctgtaccaggcgtacgaccagcagtgccagcgcgagggcgtggtcgacttcccc
gagctgctgctgcgctgctacgagctgctcgcgtacaacgcgccgctgcgcgcgcactac
caggcacgcttccggcacatcctcgtcgacgagttccaggacaccaacaagctgcagtac
gcgtggctcaagatgctcgcgggcggcgagaacgcgatcttcgcggtcggcgacgacgac
cagtcgatctacgcgttccgcggcgcgaacgtcggcaacatgcgcgacttcgaagacgaa
ttccgcgtgcgcaacctgatcaagctcgagcagaactaccggtcgcacggcaacatcctc
gacgcggcgaaccagctgatctcgaacaacgcgcaccgcctcggcaagaacctgcgcacc
gacgccggccacggtgagcccgtgcgcgtgtacgaggcgagcaccgatgcgcaggaagcc
ggctggatcgtcgaggagatccgctcgctgatcaacaccggaatgtcgcgcagcgaagtc
gccgtcctgtatcgcagcaacgcgcaatcgcgcgcgatcgagcacacgctgatgacctcg
ggcattccgtatcgcgtgtacggcggcctgcgcttcttcgagcgccaggaagtgaagcat
gcgctcgcgtacctgcgcctgatcgacaacccgaacgacgacaccgcgttcgtgcgcgtc
gtgaacttcccgacgcgcgggatcggcgcgcgctccatcgagcagctcgcggatgccgcg
cgcctgtacgactgttcgatggccgccgcgattccgtacgtgaccggcaaggccggcacg
agcctcggcgggttcgcgacgctgatcgcgaagatgcgcgccgagacgcagcagatgagc
ctgcccgagacggtcgagtacgtcgtgcgcgcgagcggcctcgccgatttctaccagggc
gagcgcgaaggccaggaccgcctcgagaacttgcaggaactcgtgaacgcggccaccgcg
ttcgtcagcgaggaaggctacgggctcgacgcgccggcccgctcgatcccgctgcgcgcg
ggggcgatcgcggcgccggagctcggcgtggatgcgaacgatccgtcggtcgacgtgctc
gatccggcgccgctcgacgaccccgcgcagaaccccgacacgatgacgccgctcgcgggc
ttcctgtcgcacgcatcgctcgaagccggcgacaaccaggcgcaggccggccaggacgcc
gtgcagctgatgacggtgcacgcggcgaagggcctcgaattctcggccgtgttcatcacc
ggcctggaggaagggctgttcccgcacgagaacagcgtgctcgaatcggacggcctcgag
gaagagcgccggctgatgtacgtcgcgatcacgcgggcgaaggagcggctctacctgtcg
ttcgcgcagagccggatgctgcacggccagacgcgctacaacgtgcgctcgcgcttcttc
gacgaattgccggagcacgtgctgaagtggctgacgccgaaggtcgaggcgggcgcgcgt
tggggcggccgttcggacaatgccggctgggggcgcgactggttctcgcggccgggcggc
ggcagtcgcgagcaggtcgtcgacgcggcggtttccgcgccgctgccggcgttcgcgaac
aagcagcgcgcggccgacaccggctttcgcgtcggccagcaggtatttcataccaagttc
ggcgagggcacggtcaccgcgctcgaaggcaacggcgccgatgcgaaggcgcaggtgaag
ttcaagcggcacggcgagaagtggctcgcgctggcggtcgcgaaactgcaggcggtggaa
tga
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