Burkholderia ambifaria AMMD: Bamb_1416
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Entry
Bamb_1416 CDS
T00398
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam00061
Fatty acid biosynthesis
bam00071
Fatty acid degradation
bam01100
Metabolic pathways
bam01212
Fatty acid metabolism
bam02024
Quorum sensing
bam04146
Peroxisome
Module
bam_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Bamb_1416
00071 Fatty acid degradation
Bamb_1416
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Bamb_1416
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bamb_1416
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bam01004
]
Bamb_1416
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bam04147
]
Bamb_1416
Enzymes [BR:
bam01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Bamb_1416
Lipid biosynthesis proteins [BR:
bam01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Bamb_1416
Exosome [BR:
bam04147
]
Exosomal proteins
Exosomal proteins of breast milk
Bamb_1416
Exosomal proteins of breast cancer cells
Bamb_1416
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ABI86974
UniProt:
Q0BFU9
LinkDB
All DBs
Position
1:complement(1559425..1561179)
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AA seq
584 aa
AA seq
DB search
MSSSAATATTQLPPNSDGVWYASYPPGVPHEIDVTQYTSLVQFFDECTTRFAERVAYVSA
GASMTYRTLAQKVDAFASYLQSMGVKPGDRVAIMLPNTFQYPVALFGTLKAGAIVVNVNP
LYTARELAHQLKDSGAQTIVVFENFARTLQEALPETQVKNIVVTALGDLLADGFNAKGRL
INFVLKHVKKLVPDYSLPQAIRLRSALALGARGKPQPVPTTRDDLAFLQYTGGTTGVAKG
AMLTHGNLIANLLQAKAWIADQVSGDVETVLTPLPLYHIYSLTVNAFIFMGLGGRNILIA
NPRDMKMVMKIIRNETFTGITGINTLYNAFLDNEEFRKRDFSQLKLAMAGGMAMQRAVAE
RFQQVTGRPVVEGYGLTECSPIVTMNPVNLNDMGEFSGSIGLPAPSTLVRFRREDGTWAA
VGEPGELCVHGPQVMRGYWQRPDETAKVIDADGWLATGDIGVMDERGFIRLIDRKKDMIL
VSGFNVYPNEIEEVLVMHPGISEAAAIGIPDEVQGERIKVFVVRRDPTLTVDDVLAHCRK
NLTGYKMPKFVEFRDALPQTNVGKILRRALRDEELARIKAAKQG
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcatccgcagcaaccgcaacgacccagctcccgccgaacagcgacggcgtctgg
tacgcgtcgtatccgcccggcgtgccgcacgagatcgacgtcacgcaatacacgtcgctc
gtgcagttcttcgacgaatgcacgacgcgcttcgccgagcgggtcgcgtacgtgagcgcg
ggcgcatcgatgacttaccgcacgctcgcgcagaaagtcgacgcgttcgcgtcgtatctg
caaagcatgggcgtaaagcccggcgaccgcgtcgcgatcatgctgccgaacacgttccag
tatccggtcgcgctgttcggcacgctgaaggccggcgcgatcgtcgtcaacgtcaatccg
ctctataccgcgcgcgaactcgcgcaccagctgaaggacagcggcgcgcagacgatcgtc
gtgttcgagaacttcgcgcgcacgctgcaggaagcgctgccggaaacgcaggtgaagaac
atcgtcgtcaccgcgctcggcgacctgctcgccgacggtttcaatgcgaagggacgcctg
atcaacttcgtgctgaagcatgtgaagaagctggtgcctgactacagcctgccgcaggcg
atccggctgcgctccgccctcgcgctcggcgcgcgcggcaaaccgcagccggtgccgacg
acgcgcgacgatctcgcgttcctgcaatacaccggcggcacgaccggcgtcgcgaaaggc
gcgatgctcacgcacggcaacctgatcgcgaatctgctgcaggccaaggcgtggatcgcc
gatcaggtgtcgggcgacgtcgagaccgtgctgacgccgctgccgctctatcacatctat
tcgctgacggtgaacgcgttcatcttcatggggctcggcgggcgcaacatcctgatcgcg
aacccgcgcgacatgaagatggtgatgaagatcatccgcaacgaaacgtttaccgggatc
accggcatcaacacgctgtacaacgcgttcctcgacaacgaggaattccgcaagcgcgac
ttctcgcagctcaagctcgcgatggcgggcggaatggcgatgcagcgcgcggtcgcggag
cgcttccagcaggtcacgggccggcccgtcgtcgaaggctacgggctcaccgaatgctcg
ccgatcgtcacgatgaatccggtgaacctgaacgacatgggcgaattcagcggctccatc
ggcctgcccgcgccgtcgacgctcgtgcgctttcgccgcgaggacggcacctgggccgcc
gtcggcgagccgggcgaactgtgcgtgcacgggccgcaggtgatgcgcggctactggcag
cggcccgacgagaccgcgaaggtgatcgacgccgacggctggctcgccaccggcgacatc
ggcgtgatggacgagcgcggcttcatccgcctcatcgaccgcaagaaggacatgatcctc
gtgtcgggcttcaacgtgtacccgaacgagatcgaggaagtgctggtgatgcatccgggc
atcagcgaagccgcggccatcggtatcccggacgaagtccagggcgaacggatcaaggtc
ttcgtcgtgcgtcgcgacccgacgctgacggtcgacgacgtgctcgcgcactgccgcaag
aacctgaccggctacaagatgccgaagttcgtcgagttccgcgacgcgctgccgcagacc
aacgtcggcaagatcctgcgccgcgcgctgcgcgacgaggagctcgccaggatcaaggcc
gcgaaacaaggctga
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