Burkholderia ambifaria AMMD: Bamb_1488
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Entry
Bamb_1488 CDS
T00398
Name
(GenBank) Rhodanese domain protein
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
bam
Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bam03016
]
Bamb_1488
Enzymes [BR:
bam01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
Bamb_1488
Transfer RNA biogenesis [BR:
bam03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Bamb_1488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
AAA_16
ABC_tran
AAA_22
RsgA_GTPase
MMR_HSR1
PduV-EutP
AAA_28
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
ABI87046
UniProt:
Q0BFM7
LinkDB
All DBs
Position
1:1632890..1634017
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AA seq
375 aa
AA seq
DB search
MKNLIVTLDRAGEFDEIIDVRTPLEFAEDHIPGALNAPVLSNEERVIVGTMYRQVSPYEA
TRVGAAMVARNIARHLDTTFADRPRNWRPLIYCWRGGKRSGSMTTWFNLIGWQARQLDGG
YKSYRRSVCATLDTLPTRFRYIALVGHTGCGKTRLLNALRDEGAQTLDLEALACHRGSLL
GALPGVPQPAQKSFDSGLVGTLERFDPAWPVFVESESRKIGLVQLPLALMDAFRAGPWVQ
VEAEHDERIAFLLEDYAHLFDEPAAFKAQLHRLIGLHSREEVARWNALIDANARAELFGT
LIDKHYDPAYARTYRSSYDKSNRVLTFTFRPNAADVRQQARALLDALARAGLPASPVAGN
AAGSDTDTNQSTTTR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaacctgattgtcaccctcgatcgcgctggcgagttcgacgagatcatcgacgtg
cgtacgccgctcgagttcgccgaagatcatattcccggcgcgctgaacgcacccgtgctc
agcaacgaggagcgcgtgatcgtcggcacgatgtaccgtcaggtgtcgccgtacgaagcg
acgcgcgtcggcgcggcgatggtcgcacgcaacatcgcgcgccatctcgacaccacgttc
gccgaccgtccgcgcaactggcggccgctgatctactgctggcgcggcggcaagcgctcg
ggctcgatgacgacctggttcaacctgatcggctggcaagcgcggcagctcgacggcggc
tacaagtcataccgccgctcggtgtgcgcgacgctcgacacgctgcccacgcggttccgc
tacatcgcgctcgtcggccacacgggctgcggcaagacgcggctcctgaacgcgctgcgc
gacgaaggggcacagacgctcgacctcgaggcgctcgcctgccaccgcggctcgctgctc
ggcgcattgccgggtgtgccgcagcccgcgcagaagtcgttcgattcgggtctcgtcggc
acgctggagcgtttcgaccccgcatggcctgtcttcgtcgaatcggaaagccgcaagatt
gggctcgtgcagttgccgctcgcgctgatggacgcgtttcgcgcggggccgtgggtgcag
gtcgaggccgagcatgacgaacgcatcgcgttcttgctcgaggactacgcccacctgttc
gacgaaccggccgcgttcaaggcgcaattgcatcgcctgatcggcctccacagccgggaa
gaggtcgcgcgctggaacgcactgatcgacgcgaacgcgcgtgccgaactgttcggcacg
ctgatcgacaagcattacgatcctgcgtatgcacgcacctatcgttcgtcgtacgacaaa
tcgaaccgcgtgctgacgttcacgttccggccgaatgcggccgacgtgcgccagcaagcg
cgtgcgctgctcgacgcgctcgcgcgcgccgggcttccggcgtcgcccgtcgccggcaac
gcagcaggatccgacaccgacacaaaccaatcgaccaccacacgatga
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