Burkholderia ambifaria AMMD: Bamb_1628
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Entry
Bamb_1628 CDS
T00398
Name
(GenBank) WD-40 repeat-containing protein
KO
K20332
toxoflavin biosynthesis protein ToxC
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bamb_1628
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
eIF2A
Cytochrom_D1
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-ProteinID:
ABI87186
UniProt:
Q0BF87
LinkDB
All DBs
Position
1:complement(1801990..1803687)
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AA seq
565 aa
AA seq
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MIAHRAPISGIAAHRDQYVLTAGYDNQVILWDAKTLRPLARAMHDHLANQGAFSPDGAYV
VTSSSDYSARLWTVPDLRLVAVFADQEDDVEMSAFHPDEPLVATASRDHRVRVYDFAGKL
LHTFGGHTADVISVEWMRGANEIVSSSDDGTIKRWSLAKNALVADINLDGIETDTIAIAA
DGRIFAGNDEGAIIAIGVDGTRATIDAHDAGVKRLVLDIDRGLLVSLSYDCTMRLWKIGA
AGEPQALGGAALPPEVWPRSCSFQGDEHIVFSTFHSRYHRYNWKTEHWDGLELQPTHGAN
AVQSLEGHLWTIGDAGIVRVDQHEHARMGSLCNFLAPAGQLILTGGQLGKLFDARSGGEL
HRHRSPLNCGAAFERGGATCAVIGTYRGEGIVLRIDGTRATHVTDLPLHANAVKGIAISG
DLIFSVAADASACWYRASTLEPVFEIKRAHDKIANGCAGLGEGYFASVSRDLKLRIWSPD
HRAEVIATPHTRSIKCVAASNDGRYVATGSYNGRVAVYDRIDGCWTLDGCVTTAGVSSLA
YDPATQAFVASSYDGNVYRVPLERA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcccaccgcgcaccgatcagcggaattgctgcgcaccgcgaccagtacgttctg
acggccggttacgacaatcaggtcatcctgtgggacgcgaaaaccctgcgtccgctggct
cgcgcgatgcacgaccacctcgcaaaccagggggcgttttcaccggacggcgcatacgtc
gtcacgtcgtcgtccgattacagcgctcgcctctggaccgtgcccgatctgcggctcgtc
gccgtgttcgccgaccaggaggacgacgtcgaaatgagcgcgttccacccggacgagccg
ctcgtcgcgaccgcttcgcgcgatcaccgcgtgcgggtgtacgacttcgccggcaagctg
ctgcacacgttcggcggccacaccgccgacgtcatttcggtcgaatggatgcgtggcgcc
aacgaaatcgtatcgtcgagcgacgacggcacgatcaagcgctggtcgctcgccaagaac
gccctcgtcgccgacatcaacctcgacggcatcgaaaccgacacgatcgcgatcgccgcg
gacgggcgcatctttgcgggcaacgacgaaggcgcgatcattgcgatcggcgtcgacggc
acacgcgcgacgatcgacgcgcacgatgccggcgtgaagcgtctcgtgctcgacatcgat
cgaggcttgctcgtatcgctgtcttacgactgcacgatgcggctctggaaaatcggcgcg
gccggcgaaccgcaggcgctcggcggcgcggcgctaccgcccgaggtgtggccgcgctcc
tgttcgttccaaggcgacgagcacatcgtgttctcgacgttccattcgcgctatcaccgt
tacaactggaaaaccgagcactgggatgggctcgagttgcagccgacacatggtgcgaac
gcggtgcagtcccttgagggccatctgtggacgatcggagatgcgggcattgtgcgtgtc
gaccagcacgagcatgcgcgcatgggcagcctgtgcaatttcctcgcgcctgccggtcag
ttgatcctgacaggcggccagctcggcaagctgttcgatgcacgcagcggcggcgaatta
catcggcaccgctctccgctgaactgcggcgcggcattcgaacgcggcggcgcaacgtgc
gcggtgatcggcacgtataggggcgaaggtatcgtgctgcgcatcgacggcactcgggcc
acgcacgtcaccgatctgccgctgcacgcaaacgcggtcaagggtatcgcgatctccggc
gatctgattttctcggtcgccgccgacgcatcggcatgctggtatcgcgcctcgacactc
gagccggtgttcgaaatcaagcgcgcgcacgacaagatcgccaacggttgcgcgggcctc
ggcgaaggctacttcgcgtcggtgagccgggatctgaagctacgaatctggtcgcccgac
catcgcgcggaggtgatcgcgaccccgcacacgcgctcgatcaagtgcgtcgcggcgagc
aatgatggccgctacgtcgcgacgggaagttacaacggccgcgttgccgtctacgaccgt
atcgacggatgctggacgctcgacgggtgcgtgacaacggcgggtgtgtcgtcgctcgct
tacgatccggccacgcaggcgttcgtcgccagctcgtacgacggaaacgtgtaccgcgtc
ccactggagcgcgcatga
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