Burkholderia ambifaria AMMD: Bamb_1767
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Entry
Bamb_1767 CDS
T00398
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bamb_1767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bam03021
]
Bamb_1767
03019 Messenger RNA biogenesis [BR:
bam03019
]
Bamb_1767
Transcription machinery [BR:
bam03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Bamb_1767
Messenger RNA biogenesis [BR:
bam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bamb_1767
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_25
ATPase_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABI87323
UniProt:
Q0BEV0
LinkDB
All DBs
Position
1:1953847..1955109
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AA seq
420 aa
AA seq
DB search
MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLALEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVVLFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNSEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtgtccgaactgatcgaaatggccaatggc
ctggagatcgaaaacgcgaaccgcctgcgcaagcaggagctgatgttcgccattctcaaa
aagcgcgccaagacgggagagacgatcttcggcgacggcacgctcgaagtactcccggac
ggcttcggcttcctgcgctcgccggaaatgtcgtacctcgcaagtaccgacgacatctat
atcagcccgtcgcagattcgccgcttcaatctgcacaccggcgacacgatcgaaggtgaa
gtccgcacgccgaaggacggcgagcgctacttcgcgctggtgaaggtcgacaaagtcaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctggcgctcgaacgcgagatgcgcggcgaagagaacgtcacgggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctcgtcgcgtcgccg
aagtcgggcaagaccgtgatgctccagcacatcgcacacgcgatcaagcagaaccacccg
gacgtcgtcctgttcgtgctgctgatcgacgagcgccccgaagaagtgaccgaaatgcag
cgctcggtcgccggcgaagtgatcgcatcgacgttcgacgaaccggccacgcgtcacgtg
caggtcgccgaaatggtgatcgagaaggccaagcgcctcgtcgaaatgaagcacgacgtc
gtgattctgctcgactcgatcacgcgtctcgcacgcgcttacaacaccgtgatcccggcg
tcgggcaaggtgctgacgggcggtgtcgacgcgaacgcactgcagcgtccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggctcgctgacgatcatcggcaccgcgctg
atcgaaaccggtagccgcatggatgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgccgcctcgcggaaaagcgcgtctatccttcgatcaacctg
aacaagtcgggcacgcgtcgcgaagaaatgctgatcaagcccgagatccttcaaaagatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaggccatggaattcctgctc
gacaagatccgtcagacgaagagcaactccgagttcttcgacctgatgcgccgcggcggc
tga
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