Burkholderia ambifaria AMMD: Bamb_1974
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Entry
Bamb_1974 CDS
T00398
Name
(GenBank) pyridine nucleotide-disulfide oxidoreductase dimerization region
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam00010
Glycolysis / Gluconeogenesis
bam00020
Citrate cycle (TCA cycle)
bam00260
Glycine, serine and threonine metabolism
bam00280
Valine, leucine and isoleucine degradation
bam00310
Lysine degradation
bam00380
Tryptophan metabolism
bam00620
Pyruvate metabolism
bam00630
Glyoxylate and dicarboxylate metabolism
bam00640
Propanoate metabolism
bam00670
One carbon pool by folate
bam00785
Lipoic acid metabolism
bam01100
Metabolic pathways
bam01110
Biosynthesis of secondary metabolites
bam01120
Microbial metabolism in diverse environments
bam01200
Carbon metabolism
bam01210
2-Oxocarboxylic acid metabolism
bam01240
Biosynthesis of cofactors
Module
bam_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bam_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bam_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
bam_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
bam_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Bamb_1974
00020 Citrate cycle (TCA cycle)
Bamb_1974
00620 Pyruvate metabolism
Bamb_1974
00630 Glyoxylate and dicarboxylate metabolism
Bamb_1974
00640 Propanoate metabolism
Bamb_1974
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bamb_1974
00280 Valine, leucine and isoleucine degradation
Bamb_1974
00310 Lysine degradation
Bamb_1974
00380 Tryptophan metabolism
Bamb_1974
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Bamb_1974
00670 One carbon pool by folate
Bamb_1974
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bam04147
]
Bamb_1974
Enzymes [BR:
bam01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
Bamb_1974
Exosome [BR:
bam04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
Bamb_1974
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
NAD_binding_8
Lys_Orn_oxgnase
Thi4
FAD_binding_3
HI0933_like
FAD_binding_2
DAO
2-Hacid_dh_C
NAD_binding_2
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ABI87530
UniProt:
Q0BE93
LinkDB
All DBs
Position
1:complement(2172099..2173538)
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AA seq
479 aa
AA seq
DB search
MTRMKVDVAIIGAGSAGMTAYRAAKAHTDSVVVIEGGVYGTTCARVGCMPSKLLISAANA
AHALKMAPSFGVNPGMIEVNGRKVMHRVRSERDRFVGFVVETVEGWPEAHRLRGTAKFLS
PHELLVGSTIVEADRIVVATGSSPYVPEGWHEALGDRQLINDDVFDWADLPGSVAVVGTG
VIGLELGQALHRLGVRVRLYGRSRSIGPLTDPAVAAEATRIFSDEVPVSLGATISPKLTT
DRRVSITSIDEHGVHSTEIYDYLIVATGRRPNTSGLDLELAGVRLDSSGQPVFDRATGQS
APSHIFIAGDVNGMTEILHEAADDGRIAGDNAGRFPLVRPRPRRAPLGIVFSDPQIAMIG
STFQQLTASGAAFEIGESSFADQGRSRVMLENRGMIRVYADTATGVFLGAEMVGPASEHI
GHLLSWSVQRGDTVQQMIDSPFYHPVVEEGVRTALRHLQRKLALVPQAPESCLDCVPGA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtatgaaggttgatgtggcgatcattggcgctggcagcgccggcatgaccgcc
taccgtgcagccaaggctcacactgacagcgtggttgtcattgagggtggcgtctacggc
accacgtgcgctcgggttggttgcatgccgagcaaactactgatcagcgccgccaatgcc
gcccacgcgttgaagatggcaccgagcttcggtgtcaatccgggcatgatcgaggtcaat
ggccggaaagtaatgcatcgggttcgcagcgaacgggaccgcttcgtgggtttcgtcgtg
gaaacggtcgagggttggccggaagcgcatcgcttgcgtggcacggcaaagttcctgtcg
ccccacgaactacttgtgggatctacgattgtcgaggctgatcgcattgtcgttgccacc
ggttccagtccctatgttcctgagggctggcatgaagccttgggcgacaggcagctgatc
aacgacgacgttttcgactgggccgatctgcccggctcggtggctgtcgtcggaaccgga
gttatcggacttgagttgggacaggcgttgcatcgactgggcgtgagagtgcgcctgtac
ggccgcagtcgatctatcggcccgctgaccgaccctgcggttgcggcggaggctacccgc
attttttccgatgaggttcctgtgagcctgggggccacgatttcgcccaagctgactaca
gataggcgcgtatcgatcacgtcaatcgatgagcacggtgttcattcgaccgaaatctac
gactacctgatcgttgcgacaggtcgccggccaaatacgtccgggcttgatctggaactt
gctggcgttaggctggacagttccggccagcctgtgttcgatcgtgccaccgggcagagc
gctccctcgcacattttcatagccggcgacgtcaacggcatgacggagattcttcacgaa
gcggccgacgatggccgtatcgcaggtgacaacgccgggcgattcccgctcgtcaggcct
cgcccccgcagagcgccgctcggcatcgtgttctcagatccgcagatcgcgatgatcggg
tccacattccagcagttgacggcgagcggcgcggcctttgagatcggtgaatcctcgttc
gccgaccaagggcgaagccgggtgatgctggagaaccgcggtatgattcgcgtttacgca
gacacggcgaccggggtcttcctgggcgcggagatggtggggccagcttccgaacatatc
ggccacctgctgtcgtggagcgtccagcggggcgataccgtacagcaaatgatcgacagt
ccgttctaccacccggtcgtggaggaaggcgtccgcaccgcgttgcgacatctgcagcga
aagcttgcccttgtacctcaggcgcccgagagctgcctggactgcgtacccggcgcttga
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