KEGG   Burkholderia ambifaria AMMD: Bamb_2004
Entry
Bamb_2004         CDS       T00398                                 
Name
(GenBank) type II secretion system protein E
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
bam  Burkholderia ambifaria AMMD
Pathway
bam02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bam00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Bamb_2004
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bam02044]
    Bamb_2004
Enzymes [BR:bam01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Bamb_2004
Secretion system [BR:bam02044]
 Type IV secretion system
  Trb secretion system protein
   Bamb_2004
SSDB
Motif
Pfam: T2SSE TrwB_AAD_bind AAA_16 nSTAND3 FtsK_SpoIIIE ABC_tran Zeta_toxin AAA_28 AAA_30 DEAD ResIII CbiA AAA_25 IstB_IS21 ATPase AAA_7 MMR_HSR1 AAA_19 AAA_29 Phosphatase GTP_EFTU MobB Sigma54_activat AAA_22 Parvo_NS1 TsaE
Other DBs
NCBI-ProteinID: ABI87560
UniProt: Q0BE63
LinkDB
Position
1:2200631..2201677
AA seq 348 aa
MSAVPQIPPEPRSSATTSQNRRIQMLRTAMGPLIAAALEDPDVVEIMLNPDRSLWVDRLS
SGRAPLGVELPEADGERIIRLVAAHVGAEVHRGRPLLTAELPETGERFEGILPPAAPGPA
FALRKRAVSIIGLDRYVADGILTAGQADFLRRAVRERQNILIAGGTSTGKTTLANALLAE
IAATGDRVLVLEDTIELQCAARDHVPLRTRAGVVSMQELVRATMRLRPDRVIVGEVRGGE
ALDLIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALIAEAINVVIHIAGR
GRKRHVESIARVVGFDGAGYRMADALEMPFPELPPVPSPSPEPSGELP
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgagcgccgttccacagatcccgccagaaccacgctcgtcggccaccacttcacagaat
cgccgcatccagatgctgcgcacggcaatggggccgctgatcgccgccgcgctcgaagac
ccggacgtggtggaaatcatgctcaaccccgaccgcagcctatgggtcgatcggctgtcg
tcgggccgtgcgccgctgggcgtcgaactgcccgaggccgatggcgaacgcatcattcgc
ctggtggccgcccacgtcggtgcagaggtgcatcgcggccgaccattgctgaccgccgag
ctgcccgaaaccggcgagcggttcgagggcatcctgcccccggccgcacccggcccggcc
ttcgcgctgcgcaagcgcgccgtgagcatcatcggcctggatcgctacgtcgccgacggc
atcctgactgccggccaggccgacttcctgcgccgcgccgtgcgcgagcgccagaacatc
ctgatcgccggcggcaccagtaccggcaagaccacgctcgccaacgcgctgctggccgag
atcgccgccaccggtgaccgcgtgctggtgctcgaagacaccatcgagctgcaatgcgcc
gcccgcgaccatgtgccgctgcgcacgcgcgcgggcgtggtgtcgatgcaggagctggtg
cgcgccacgatgcgcctgcgccccgaccgcgtgatcgtcggcgaggtgcgcggcggcgag
gcgcttgatctcatcaaggtgtggggcaccggccaccccggcggcatcgccacgattcac
gccggttccgccttgggcgcgctgctgcgcctggagcaactgattctcgaagtggcggtg
aatccgccgcgcgcgttgatcgccgaggccatcaacgtcgtcatccacatcgccgggcgt
ggccgcaagcgccacgtcgaaagcatcgcacgcgtcgtcggtttcgacggcgcgggctat
cgcatggcggatgcgctggaaatgccgtttcccgagctgccgccagttccttccccgtcc
cctgaaccctctggagaactgccatga

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