KEGG   Burkholderia ambifaria AMMD: Bamb_2172
Entry
Bamb_2172         CDS       T00398                                 
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bam  Burkholderia ambifaria AMMD
Pathway
bam00010  Glycolysis / Gluconeogenesis
bam00020  Citrate cycle (TCA cycle)
bam00260  Glycine, serine and threonine metabolism
bam00280  Valine, leucine and isoleucine degradation
bam00310  Lysine degradation
bam00380  Tryptophan metabolism
bam00620  Pyruvate metabolism
bam00630  Glyoxylate and dicarboxylate metabolism
bam00640  Propanoate metabolism
bam00670  One carbon pool by folate
bam00785  Lipoic acid metabolism
bam01100  Metabolic pathways
bam01110  Biosynthesis of secondary metabolites
bam01120  Microbial metabolism in diverse environments
bam01200  Carbon metabolism
bam01210  2-Oxocarboxylic acid metabolism
bam01240  Biosynthesis of cofactors
Module
bam_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bam_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bam_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
bam_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bam_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bam00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Bamb_2172
   00020 Citrate cycle (TCA cycle)
    Bamb_2172
   00620 Pyruvate metabolism
    Bamb_2172
   00630 Glyoxylate and dicarboxylate metabolism
    Bamb_2172
   00640 Propanoate metabolism
    Bamb_2172
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Bamb_2172
   00280 Valine, leucine and isoleucine degradation
    Bamb_2172
   00310 Lysine degradation
    Bamb_2172
   00380 Tryptophan metabolism
    Bamb_2172
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Bamb_2172
   00670 One carbon pool by folate
    Bamb_2172
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bam04147]
    Bamb_2172
Enzymes [BR:bam01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     Bamb_2172
Exosome [BR:bam04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   Bamb_2172
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox Biotin_lipoyl_2 FAD_oxidored GIDA AlaDh_PNT_C Pyr_redox_3 NAD_binding_8 FAD_binding_2 GCV_H Thi4 DAO FAD_binding_3 PASTA 3HCDH_N SpoV NQRA_N HI0933_like
Other DBs
NCBI-ProteinID: ABI87728
UniProt: Q0BDP5
LinkDB
Position
1:complement(2383603..2385369)
AA seq 588 aa
MSLIEVKVPDIGDFSGVDVIEVNVKPGDVIEKEQTLITLESDKASMEVPSDVAGTVKEVK
VKAGEKVSQGTIIAIVEAAATDAAPVKAPEPAKPAAAAPAPAAAAPAAAPQAGSYSGTAD
IECDMLVLGAGPGGYSAAFRSADLGMKTVLVERYSTLGGVCLNVGCIPSKALLHTALVID
EAAALASHGITFGKPEVDLDKLRDFKGGVVKKLTTGLAGMAKARKVEVVTGVGAFVDPYH
MEVQGENGKKVVKFKQAIIAAGSQAVKLPFMPEDPRVVDSTGALELRQLPKRMLVIGGGI
IGLEMATVYATLGAEIDVVEMMDGLMMGADRDLVKVWEKYNAKRFGNVMLKTKTVGAEAK
EDGIYVKFEGEKAPAEAQRYDLVLVAVGRSPNGKTIGADKAGVAVTDRGFIDVDKQMRTN
VPHIFAIGDVVGQPMLAHKAVHEGHVAAEAAHGEKAYFDALQIPSVAYTDPEVAWAGKTE
DQCKAEGIKYGKAVFPWAASGRAIANGRDEGFTKLIFDEETHRVIGGGIVGLNAGDLISE
VCLAVEMGADAEDIGKTIHPHPTLGESIGMAAELYEGVCTDLPPQRKK
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgagtctcatcgaagtcaaagttccggatatcggcgatttcagcggcgtcgatgtcatc
gaagtcaacgtgaaacccggcgacgtgatcgaaaaagagcaaacgctcatcacgctcgaa
tccgataaagcctccatggaagtgcccagcgacgtcgccggcaccgtcaaggaagtcaag
gtcaaagccggcgagaaagtctcgcaaggcaccatcatcgccatcgtcgaagcagcagca
accgacgccgcacccgtgaaagctccggaaccggccaagccggcagccgctgcgccggca
ccggccgcagccgctcccgcagccgcgccgcaagccggcagctacagcggcaccgccgac
atcgagtgcgacatgctcgtgctcggcgccggccccggcggctattcggccgcgttccgc
tcggccgacctcggcatgaagacggtgctggtcgaacgctattcgacgctcggcggcgtg
tgcctgaacgtcggttgcatcccgtcgaaggcactgctgcacacggcgctcgtcatcgac
gaagccgcggcgctcgcgtcgcacggcatcacgttcggcaagccggaagtcgatctcgac
aagctgcgcgacttcaagggcggcgtcgtcaagaaactgacgacgggcctcgccggcatg
gcgaaggcgcgcaaggtcgaagtcgtcaccggcgtcggcgcattcgtcgatccgtatcac
atggaagtgcagggcgaaaacggcaagaaggtcgtcaagttcaagcaggcaatcatcgcc
gcgggctcgcaagcggtgaagctgccgttcatgccggaagacccgcgcgtcgtcgattcg
acgggcgcactggaactgcgccaactgccgaagcggatgctggtgatcggcggcggcatc
atcggcctcgaaatggccacggtgtacgcaacgctcggcgccgagatcgacgtggtcgaa
atgatggacggcctgatgatgggcgcggaccgcgatctcgtgaaggtctgggaaaagtac
aacgcgaagcgcttcggcaacgtgatgctgaagaccaagacggtcggcgcggaagcgaag
gaagacggcatctacgtgaagttcgagggcgagaaggcgccggcggaagcgcagcgctac
gacctcgtgctcgtcgcggtgggccgcagcccgaacggcaagacgatcggcgccgacaag
gcgggcgtggccgtcaccgaccgcggcttcatcgacgtcgacaagcagatgcgcacgaac
gtcccgcacatcttcgcgatcggcgacgtcgtcggccagccgatgctcgcgcacaaggcc
gtgcacgaagggcacgtcgcagcggaagccgcgcacggcgagaaggcatacttcgacgcg
ctgcagatcccgtcggtggcctataccgatccggaagtggcgtgggccggcaagacggaa
gaccagtgcaaggccgaaggcatcaagtacggcaaggcggtgttcccgtgggccgcatcg
ggccgcgcgatcgcgaacggccgcgacgaaggcttcacgaagctgatcttcgacgaggaa
acccatcgcgtgatcggcggcggcatcgtcggcctgaacgcgggcgacctaatcagcgaa
gtatgtctcgccgtcgagatgggcgcggacgcggaagacatcggcaagacgatccatccg
cacccgacgctcggcgaatcgatcggcatggccgccgaactgtacgaaggcgtgtgtacg
gacctgccgccgcaacgcaagaagtaa

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