Burkholderia ambifaria AMMD: Bamb_2217
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Entry
Bamb_2217 CDS
T00398
Name
(GenBank) deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bam
Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bam03400
]
Bamb_2217
Enzymes [BR:
bam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Bamb_2217
DNA repair and recombination proteins [BR:
bam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Bamb_2217
Prokaryotic type
Bamb_2217
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABI87773
UniProt:
Q0BDK0
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All DBs
Position
1:complement(2443398..2444975)
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AA seq
525 aa
AA seq
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MASVDIARACRDNTHHFSVSCREVPVSAKSSVAPAVVWFRDDLRVTDQPALTRAVASGRP
LVCVYVDDTGDGAGRALGGAARWWLHGALAALDAALARHGGHLLLLRGDAQREIERIVHD
TGAAAVYWNRRYAQPQRDADAALKASLKARGLEVESSNGSLLNEPWEVMTGAGTPFQVFT
AYWRAVRRDRTVMAPLPEPERIAFHPWPAAVRERALALDALALRPHAPDWAGGLRDEWPA
PDEAGAHARLDAFVHASLAGYADTRDRPGEPATSRLSPFLRFGNVSPRQVWHAVQGATQA
GGAACAAGAEKFLSELGWREFSHVLLYHFPALATDNFRAQFDAMPWRDDPAALRAWQRGL
TGYPLVDAGMRELWTTGWMHNRVRMVVASFLVKHLLIDWRAGERWFHDTLVDADAANNPA
NWQWVAGCGADAAPYFRIFNPVTQGRKFDPQGEYVRRWVPELAGLDAAAIHAPWEASAAQ
LAAAGVRLGLDYPAPIVDHDGARRRALDALATLPKPGAAGRSRAV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
gtggcgagcgtcgacatcgcgcgagcctgccgcgacaatacgcatcacttttccgtttcc
tgccgcgaggtgcccgtgtccgccaagtcgtccgttgctcctgccgtcgtgtggttccgc
gacgatctgcgcgtgaccgaccagcccgcgctgacgcgcgcagtcgcgtcgggccggccg
ctcgtgtgcgtgtatgtcgacgacacgggcgacggggcggggcgtgcgctcggcggcgcg
gcgcgctggtggctgcacggcgcgctcgccgccctcgacgcggcgctcgcgcgtcatggc
ggacacctgctgctattgcgcggcgatgcgcagcgcgagatcgagcgcatcgtgcacgac
acgggcgcggcggccgtgtactggaaccgccgctatgcgcagccgcagcgcgacgccgat
gcggcgttgaaggcgtcgctgaaggcgcgcggtctcgaggtcgagagtagcaacggcagc
ctgctgaacgaaccgtgggaagtgatgacgggcgccggtacgccgttccaggtgttcacc
gcatactggcgcgcggtgcggcgcgatcgcacggtgatggcgccgctgccggaaccggag
cggatcgcgtttcatccgtggccggccgccgtgcgcgaacgcgcgctggcgctcgacgcg
ctcgcgttgcgcccgcacgcgccggactgggcgggcggtctgcgcgacgagtggccggcg
cccgacgaagccggcgcgcatgcgcggctcgacgcgttcgtgcacgcgtcgctcgccggc
tacgccgacacacgcgatcgacccggtgagcccgcgacgagtcgtctgtcgccgttcctg
cgcttcggcaacgtgtcgccgcgacaggtgtggcatgcggtgcagggtgcgacacaggcg
ggcggcgcggcgtgcgcggccggtgcggagaaattcctgagcgagctcggctggcgcgaa
ttcagccacgtgctgctgtatcacttcccggcgctcgcgaccgacaacttccgcgcgcag
ttcgacgcgatgccgtggcgcgacgatcccgccgcgctgcgcgcatggcagcgcgggctg
accggctatccgctcgtcgacgcgggaatgcgcgagctgtggacgaccggctggatgcac
aaccgcgtgcggatggtcgtcgcgtcgttcctcgtcaagcatctgttgatcgactggcgg
gcgggcgagcgctggttccacgacacgctcgtcgatgcggacgccgcgaacaacccggcg
aactggcaatgggtggctggctgcggggccgacgccgcgccgtatttccgcatcttcaat
ccggtgacgcagggccggaagttcgacccgcagggtgagtacgtgcgccgctgggtgccg
gaactcgcgggcctcgacgcggcggcgatccatgcgccgtgggaggcgtccgcggcgcag
ctggcggcggccggggtgcggctcgggctcgactatccggcgccgatcgtcgatcacgac
ggcgcgcgccgtcgtgcgctcgatgcgctggccacgttgccgaagccgggcgccgccggc
cgttcgcgcgcggtgtaa
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