Burkholderia ambifaria AMMD: Bamb_2571
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Entry
Bamb_2571 CDS
T00398
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam00020
Citrate cycle (TCA cycle)
bam00480
Glutathione metabolism
bam00720
Other carbon fixation pathways
bam01100
Metabolic pathways
bam01110
Biosynthesis of secondary metabolites
bam01120
Microbial metabolism in diverse environments
bam01200
Carbon metabolism
bam01210
2-Oxocarboxylic acid metabolism
bam01230
Biosynthesis of amino acids
bam04146
Peroxisome
Module
bam_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bam_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Bamb_2571
09102 Energy metabolism
00720 Other carbon fixation pathways
Bamb_2571
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Bamb_2571
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Bamb_2571
Enzymes [BR:
bam01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Bamb_2571
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Gene cluster
GFIT
Motif
Pfam:
IDH
DUF1843
Motif
Other DBs
NCBI-ProteinID:
ABI88127
UniProt:
Q0BCJ6
LinkDB
All DBs
Position
1:complement(2830616..2832844)
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AA seq
742 aa
AA seq
DB search
MSTSPKIIYTLTDEAPALATYSLLPIVKAFTRSSGVAVETRDISLAGRIIAAFADVLPPE
QKGSDDLAELGQLTLKSEANIIKLPNISASVPQLKAAIAELQAQGYKLPAYPEDPTTDEE
KAVKARYDKIKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWKATSKAHVAHMSEG
DFYGSEKSALIAAAGSVKIELTTTDGVKKVLKEKTAVKADEIIDASVMSRKALRSFIEAQ
IADAKAQDVLFSVHLKATMMKVSDPILFGHFVSVFYSDALTKHADVLAKLGFNPNNGIGD
LYARLKDLPADTREAIEADVKAEYAVRPRLAMVNSDKGITNLHVPSDVIVDASMPAMIRD
SGGMWGPDGELSDAKAVIPDRCYAGVYQAVIEDCKQHGAFDPVTMGSVPNVGLMAQAAEE
YGSHDKTFLIPTDGVVRVTDEAGNVLLEHAVESGDIWRMCQTKDAPVQDWVKLAVNRARA
TGAPAVFWLDPARAHDAQIIAKVERYLKDHDTNGLDIRIMTPVDATRFSLERIRAGKDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMFETGAGGSAPKHVQQFVEEGFL
RWDSLGEFLALAASLEHLGHAYQNPKALVLAKTLDQATGKFLEENKSPARKVGGLDNRGS
HFYLCLYWAQALAEQTDDAALKAQFEGVAKSLADSEARILEELSAAQGTAQAIGGYYRPN
VELTSQAMRPSATLNAIVDAVA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcgcccaagatcatctacaccctcaccgacgaagcgcccgcgctcgcgacc
tattcgctgctgccgatcgtcaaggccttcacgcgctcgtccggcgtcgccgtcgaaacg
cgcgacatctcgcttgccggccgcatcatcgcggcattcgccgacgtcctgccgccggag
cagaagggttccgacgatctggccgaactgggccagctcacgctgaagtcggaagcgaac
atcatcaagctgccgaacatcagcgcgtcggtgccgcagctcaaggccgcgatcgccgaa
ctgcaggcgcagggctacaagctgccggcgtatccggaagatccgacgaccgacgaagaa
aaggcggtcaaggcccgctacgacaagatcaagggcagcgcggtgaacccggtgctgcgc
gaaggcaactccgatcgccgcgcgccgctgtcggtgaagaactacgcccgcaagcacccg
cacaagatgggcgcatggaaggccacgtcgaaggcgcacgtcgcgcacatgagcgaaggc
gacttctacggcagcgaaaagtcggcgctgatcgccgcggccggcagcgtgaagatcgaa
ctcacgacgaccgacggcgtgaagaaggtgctgaaggaaaagacggccgtgaaggccgat
gaaatcatcgacgcatcggtgatgagccgcaaggcgctgcgcagcttcatcgaagcgcag
atcgccgacgcgaaggcgcaggacgtgctgttctcggtgcacctgaaggcgaccatgatg
aaggtctcggacccgatcctgttcggtcacttcgtgtcggtgttctacagcgacgcgctc
accaagcacgcggacgtgctcgcgaaactcggcttcaacccgaacaacgggatcggcgac
ctgtacgcgcgcctgaaggacctgccggccgacacgcgcgaagcgatcgaagccgacgtc
aaggctgaatacgcggtgcgcccgcgtctcgcgatggtcaactcggacaagggcatcacg
aacctgcacgtgccgagcgacgtgatcgtcgacgcatcgatgccggcgatgattcgcgac
tcgggcggcatgtggggcccggacggcgaactgtccgacgcgaaggccgtgattccggac
cgctgctacgcgggcgtctaccaggccgtgatcgaagactgcaagcagcacggcgcattc
gacccggtcacgatgggcagcgtgccgaacgtcggcctgatggcgcaggcggccgaggaa
tacggttcgcacgacaagacgttcctgatcccgaccgatggcgtcgtgcgcgtcacggac
gaagccggcaacgtgctgctcgagcacgcggtcgagtcgggcgacatctggcgcatgtgc
cagacgaaggacgcaccggtgcaggactgggtcaagctcgcggtgaaccgtgcccgcgcg
accggcgcgccggccgtgttctggctcgatccggcccgtgcgcacgacgcgcagatcatc
gcgaaggtcgaacgctatctgaaggatcacgacacgaacggcctcgacatccgcatcatg
acgccggtcgacgcgacgcgtttctcgctcgagcgcatccgcgcgggcaaggacacgatc
tcggtcacgggcaacgtgctgcgcgactacctgaccgacctgttcccgatcatggaactc
ggcaccagcgcgaagatgctgtcgatcgtgccgctgatggccggcggcgggatgttcgaa
acgggcgcgggcggctcggcaccgaagcacgtgcagcagttcgtcgaggaaggcttcctg
cgctgggattcgctcggcgaattcctcgcgctggccgcgtcgctcgaacacctcggccac
gcttaccagaacccgaaggcgctcgtgctcgcgaagacgctcgaccaggcgaccggcaag
ttcctggaggagaacaagtcgcccgcacgcaaggtcggcggcctcgacaaccgcggcagc
cacttctacctgtgcctgtactgggcgcaggcgctggccgagcagaccgatgatgccgcg
ctgaaggcgcagttcgaaggcgtcgcgaagtcgctggccgacagcgaagcgcgcatcctg
gaagaactgtcggccgcgcagggcaccgcgcaggcgatcggcggctactaccgtccgaac
gtcgagctgacgagccaggcgatgcgcccgagcgcaacgctgaacgccatcgtcgacgca
gtcgcctga
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