Burkholderia ambifaria AMMD: Bamb_2606
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Entry
Bamb_2606 CDS
T00398
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam00061
Fatty acid biosynthesis
bam00071
Fatty acid degradation
bam01100
Metabolic pathways
bam01212
Fatty acid metabolism
bam02024
Quorum sensing
bam04146
Peroxisome
Module
bam_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Bamb_2606
00071 Fatty acid degradation
Bamb_2606
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Bamb_2606
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bamb_2606
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bam01004
]
Bamb_2606
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bam04147
]
Bamb_2606
Enzymes [BR:
bam01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Bamb_2606
Lipid biosynthesis proteins [BR:
bam01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Bamb_2606
Exosome [BR:
bam04147
]
Exosomal proteins
Exosomal proteins of breast milk
Bamb_2606
Exosomal proteins of breast cancer cells
Bamb_2606
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ABI88162
UniProt:
Q0BCG1
LinkDB
All DBs
Position
1:2869259..2870821
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AA seq
520 aa
AA seq
DB search
MSSPARSSAPPDVAALLAALPARIADVPARWAAQAPAHPALIEDARRLSYGELAQAVEAA
AERLARLGVRGGDRVMIVAENSVAQIVLLFAVARVDAWALVSNARLSASELDAIAAHARP
KLIAFATEASPDARAHAARHDATPADALPVDIGAWSYRVDPSAPDEPVAADGAAQCAALI
YTTGTTGTPKGVMLSHRNLLFIAAMSSTLRRVSPDDVVYTVLPVSHVYGLASVCLGSLYA
GATLRLAPRFSPEAVRVALADEGVTIFQGVPAMHAKLLEHLHTHAHAWRAPRLRFAYSGG
SPLDADLKARVERVYGVPLHNGYGMTESSPTITQTPLDAPRTDCSVGVPIPGVEMRIVAP
DGTDVPQGEVGEIRVRGPNVMLGYYRDADATRAAVSPDGWLGTGDLARQEADGSVTIAGR
SKELIIRSGFNVYPVEVEQVLNAHPDVVQAAVVGRAVEGNEEVLAFVELVPGASATEAAL
QAWCAQRLAPYKRPARIRVLDALPAASTGKVLKHKLRELA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgcctgcccgctcatccgcgccgcccgacgtcgcggcactgctcgccgcgttg
ccggcccgcatcgccgacgtgcctgcccgctgggccgcgcaggcgcccgcgcatccggcg
ctgatcgaggacgcgcgccgcctgtcgtacggcgagctggcgcaagccgtcgaggctgcc
gccgagcggctcgcacgcctgggcgtgcgcggcggcgatcgcgtgatgatcgtcgcggaa
aacagcgtcgcgcagatcgtgctgctgttcgcggtcgcgcgcgtcgacgcatgggcgctc
gtgtcgaacgcgcggctgtcggccagcgaactcgatgcgatcgccgcgcacgcgcgcccg
aagctgatcgcgttcgccacggaagcgtcccccgacgcgcgcgcacacgcggcgcgccac
gacgcgacgcccgccgacgcgctgccggtcgacatcggcgcgtggtcgtaccgcgtcgac
ccgagtgcgcccgacgaaccggtggcggccgacggcgccgcccaatgcgcggcgctgatc
tacacgaccggcacgacgggcacgccgaaaggcgtgatgctgtcgcatcgcaacctgctg
ttcatcgccgcgatgtcgagcacgctgcgccgcgtgtcgcccgacgacgtcgtctatacg
gtgctgcccgtgtcgcacgtgtacgggctcgcgtcggtctgcctcggcagcctgtacgcg
ggcgcgacgctgcggctcgcgccgcgcttctcgccggaggccgtgcgcgtcgcgctcgcc
gacgaaggcgtgacgatcttccagggcgtgcccgcgatgcacgcgaagctgctcgaacat
ctgcacacgcacgcgcacgcgtggcgcgcgccgcggctgcgcttcgcgtattccggcggc
tcgccgctcgacgccgacctgaaagcgcgcgtcgagcgcgtgtacggcgtgccgctgcac
aacggctacggaatgaccgagagcagcccgacgatcacgcagacgccgctcgacgcaccg
cgtaccgactgctcggtcggcgtgccgatcccgggggtggaaatgcggatcgtcgcaccg
gacggcaccgacgtgccgcagggcgaagtgggcgaaatccgcgtgcgcgggccgaacgtg
atgctcggctactaccgcgacgcggatgcaacgcgcgcggccgtgtcgcccgacggctgg
ctcggcaccggcgatctcgcgcgccaggaagcggacggctcggtgacgatcgcgggccgc
agcaaggaattgatcatccgctcgggcttcaacgtgtatccggtcgaggtcgaacaggtg
ctgaacgcgcacccggacgtcgtgcaggcggccgtcgtgggccgcgcggtcgaaggcaac
gaggaagtgctcgcgttcgtcgagctggtgcccggcgcgagcgcgaccgaggccgcgctg
caggcgtggtgcgcgcaacggctcgcgccttacaagcgccctgcgcggattcgcgtgctc
gatgcgctgccggccgcgtcgacgggcaaggtgctgaagcacaagctgcgcgaactcgcg
tga
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