Burkholderia ambifaria AMMD: Bamb_2857
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Entry
Bamb_2857 CDS
T00398
Name
(GenBank) A/G-specific DNA-adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bamb_2857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bam03400
]
Bamb_2857
Enzymes [BR:
bam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Bamb_2857
DNA repair and recombination proteins [BR:
bam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bamb_2857
Prokaryotic type
Bamb_2857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
DUF4262
DUF6083
Motif
Other DBs
NCBI-ProteinID:
ABI88413
UniProt:
Q0BBR0
LinkDB
All DBs
Position
1:complement(3150908..3152014)
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AA seq
368 aa
AA seq
DB search
MKPPRIAPAPFPVTPLHRTFATRLIAWQRTHGRHDLPWQNTRDPYRIWLSEIMLQQTQVS
TVIPYYLRFLERFPDVAALAAAPADDVMALWAGLGYYSRARNLHRCAQVVVAEHGGVFPP
TPDALAELPGIGRSTAAAIASFAYGARATILDGNVKRVLARVFGVEGFPGEKRVENDMWA
LAESLLPDAANEADVSAYTQGLMDLGATLCVRGKPDCARCPFAGDCVAQSTGRQRELPAA
RPKKAVPTRKTWMLVLRDGDAVLLERRPPAGIWGGLWCLPQADGDAALAALARGFGGGGP
VPLAPFTHTFTHFRLEIEPRLSDMTNGGLPAAHAQDAETAWVPLSGLAAYGVPAPVRKLL
DALSGPLL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
ttgaagccgccccgcattgctcccgctccgttccccgtcacgccgctgcaccgtacattc
gccacgcgcctgatcgcatggcagcgcacgcacggccgccacgacctgccgtggcagaac
acccgcgatccgtaccggatctggctctcggaaatcatgctgcagcagacgcaggtatcg
acggtcatcccgtactacctgcgctttctcgaacgttttcccgacgtcgccgcgctcgcg
gccgccccggccgacgacgtgatggcgctgtgggccggcctcggctactactcgcgcgca
cgcaacctgcaccgctgcgcgcaggtcgtcgtcgccgagcatggcggtgtattcccgcca
acgcccgacgcgctcgccgaactaccgggcatcggccgctcgacggccgcggcgatcgcg
tcgttcgcgtacggtgcgcgcgcgacgatcctcgacggcaacgtgaagcgcgtgctcgcg
cgggtgttcggcgtcgaaggctttccgggcgagaagcgtgtcgagaacgacatgtgggcg
ttggccgaatcgctgctgcccgatgccgcgaacgaggccgacgtaagcgcctatacgcag
gggctgatggatctcggcgcgacgctgtgcgtgcgcggcaagccggattgcgcgcgctgt
ccgttcgcgggcgactgcgtcgcgcaatcgacgggccggcagcgcgaactgccggccgcg
cggccgaagaaggccgtgccgacgcgcaagacctggatgctcgtgctgcgcgacggcgac
gccgtgctgctcgagcggcgtccgcccgccggcatctggggcggcctgtggtgcctgccg
caggcggacggcgatgccgcgctcgcggcactcgcacgcggcttcggcggcggcggcccg
gtgccgctcgcaccgtttacgcacacgttcacgcatttccggctcgagatcgagccgcgg
ctgagcgacatgacgaacggcgggctgccggccgcgcacgcgcaggatgccgagacggcg
tgggtgccgctgagcgggctcgctgcttacggcgtgccggcgccggtgcgcaagctgctc
gatgcgctgagcgggccgctgctgtaa
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