Burkholderia ambifaria AMMD: Bamb_3007
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Entry
Bamb_3007 CDS
T00398
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam00280
Valine, leucine and isoleucine degradation
bam00650
Butanoate metabolism
bam00907
Pinene, camphor and geraniol degradation
bam01100
Metabolic pathways
bam01120
Microbial metabolism in diverse environments
bam04146
Peroxisome
Module
bam_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Bamb_3007
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Bamb_3007
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Bamb_3007
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Bamb_3007
Enzymes [BR:
bam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
Bamb_3007
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMGL-like
DPBB_CI111
Motif
Other DBs
NCBI-ProteinID:
ABI88563
UniProt:
Q0BBB0
LinkDB
All DBs
Position
1:3326795..3327727
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AA seq
310 aa
AA seq
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MTFPTAVKIVEVGPRDGLQNEKTFVPTDVKIALVDRLSRAGFRNIEAASFVSPKWVPQMA
DGADVMAGIERRAGTVYSVLTPNLKGFENALAARADEVVIFGAASEAFSQRNINCSIAES
IARFEPVAKAAKDAGVRLRGSVSCTLGCPYQGEVPVASVVDVVERFAALGCDEIDIADTI
GVGTPKRTREVLSAVTRVFPRERLSGHFHDTYGQALANIYAALFEGIEIFHASVAGLGGC
PYAKGATGNVATEDVLYLMQGLGIDTGIDLAQVVAAGDFISNAIGRANVSRAGRALLAKA
QSATDAPSCV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacgttccccaccgccgtcaagatcgtcgaagtcggcccgcgcgacgggctgcagaat
gaaaagaccttcgtgccgaccgacgtgaagatcgcgctcgtcgaccggctgtcgcgcgcc
ggtttccgcaacatcgaggccgcgtcgttcgtgtcgccgaaatgggtgccacagatggcc
gacggcgccgacgtgatggcgggcatcgaacgtcgcgcgggcaccgtgtattcggtgctc
acgccgaacctgaagggcttcgagaacgcgctcgccgcacgcgcggacgaagtggtgatc
ttcggcgcggcgagcgaggcgttctcgcagcggaacatcaactgcagcatcgcggaaagc
atcgcgcgcttcgagccggtcgcgaaggccgcgaaggatgccggcgtgcggctgcgcggc
agcgtgtcgtgcacgctcggctgtccgtaccagggcgaggtgccggtcgcgtcggtcgtc
gacgtcgtcgaacgcttcgccgcgctcggctgcgacgagatcgacatcgccgacacgatc
ggcgtcggcacgccgaagcgcacgcgcgaagtactgtcggccgtcacgcgcgtgtttccg
cgcgaacggctgtcgggccatttccacgacacctacggccaggcgctcgcgaacatctac
gcggcgctgttcgaagggatcgagatcttccacgcgtcggtcgccggcctcggcggctgt
ccgtacgcgaagggcgcgaccggcaacgtcgcgaccgaggacgtgctgtatttgatgcag
ggcctcggcatcgacaccggcatcgacctcgcgcaggtggtcgccgccggcgacttcatc
tcgaacgcgatcggccgcgcgaacgtgtcgcgcgccggccgcgcgctgcttgcgaaggcg
cagagcgcgaccgacgcgccgagctgcgtctga
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