KEGG   Burkholderia ambifaria AMMD: Bamb_3424
Entry
Bamb_3424         CDS       T00398                                 
Name
(GenBank) type II secretion system protein E
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
bam  Burkholderia ambifaria AMMD
Pathway
bam02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Bamb_3424
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bam02044]
    Bamb_3424
   02035 Bacterial motility proteins [BR:bam02035]
    Bamb_3424
Enzymes [BR:bam01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Bamb_3424
Secretion system [BR:bam02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   Bamb_3424
Bacterial motility proteins [BR:bam02035]
 Pilus system
  Pilus assembly proteins
   Bamb_3424
SSDB
Motif
Pfam: T2SSE ABC_tran UCP018868 AAA_28 AAA_16 Zeta_toxin AAA_2 cobW AAA_29 KAP_NTPase AAA_22 nSTAND3 AAA_23 APS_kinase ATP_bind_1 AAA_18 AAA_19 AAA_30 TrwB_AAD_bind AAA_SelU ABC_ATPase Mg_chelatase NACHT AAA_5 Pox_A32 NTPase_1 nSTAND_NTPase5 FtsK_SpoIIIE MMR_HSR1 Septin Viral_helicase1 dNK Sigma54_activat AAA_14 CbiA RsgA_GTPase KTI12 AAA_RNF213_3 GTP_EFTU COMPASS-Shg1 TsaE ORC-CDC6-like SLFN-g3_helicase RNA_helicase
Other DBs
NCBI-ProteinID: ABI88978
UniProt: Q0BA45
LinkDB
Position
2:219121..220539
AA seq 472 aa
MTFGTRKRSTPEPAPAVAPAAPRDDAPAPAPAPIASHAPPPLRGAAAADTQESLIRSGKF
DAIRTAVFSSMNMSAALMKTRDEVRAGIEQVAAHTVERERLKITAGEQVLIVDAILNDMF
GVGPIEPLLADDTVSDILVNGPDQVYVERAGRLELTSLKFRDNAHVTSVAQRIAAAVGRR
VDESSPMVDARLADGSRVNVVLPPIAMRGASISIRKFAKRDITLARMAHQGNISHGMLQV
LKIACACRLNIVISGGTGSGKTTLLNALSQHIEEHERIVTIEDAAELQLLQPHVVSLETR
PENTEGLGGISQRDLVRNALRMRPDRIILGEIRGAEAFDVLQAMNTGHDGSMTTIHANTP
RDAISRLESMVMMANANLQLLSIRRQIASAVHLFVQIERMRDGVRRVTRITEIVGMEGEV
VITQDLFTFRQDSDTTRDVVKGVFEASSLRPAFAPRAAYYGMEDALSEVFRQ
NT seq 1419 nt   +upstreamnt  +downstreamnt
gtgacgttcggtacccgcaaacggtcgacgccggagcctgcaccggcagtggccccggcc
gcgccgcgcgacgacgcgcccgcgccggcgccggcaccgatcgcgagccacgcgccgccg
ccgctgcgcggggccgcggcggccgacacgcaggagtcgctgatccgctccggcaagttc
gatgcgattcgcaccgcggtgttctcgtcgatgaacatgtcggcggcattgatgaagacg
cgcgacgaagtgcgcgcgggcatcgagcaggtggccgcgcacaccgtcgagcgcgagcgc
ctgaagatcacggcgggcgagcaggtgctgatcgtcgacgcgatcctgaatgacatgttc
ggcgtcgggccgatcgagccgctgctcgccgacgacaccgtgtccgacatcctcgtgaac
ggccccgaccaggtgtacgtcgagcgcgcggggcggcttgaactcacgtcgctgaagttt
cgcgacaacgcgcacgtgacgagcgtcgcgcagcggatcgcggcggcggtcgggcgccgt
gtcgacgagagcagcccgatggtcgacgcgcgcctggccgacggcagccgcgtgaacgtg
gtgctgccgccgatcgcgatgcgcggcgcgtcgatctcgatccgcaagttcgcgaagcgc
gacattacgctcgcgcggatggcgcaccagggcaacatctcgcacgggatgctgcaagtg
ctgaagatcgcctgcgcgtgccggctgaacatcgtgatctcgggcggtaccggctcgggc
aagacgacgctgctgaacgcgctgtcgcagcacatcgaggagcacgagcggatcgtgacg
atcgaggatgcggccgagctgcaactgctgcagccgcatgtcgtgagtctcgagacgcgc
ccggagaataccgaagggctcggcggaatctcgcagcgcgacctcgtgcgcaatgcgctg
cggatgcggcccgatcgcatcatcctcggcgaaatccgcggcgcggaggcattcgacgtg
ctgcaggcgatgaatacgggccacgacggctcgatgacgacgatccatgcgaacacgccg
cgcgacgcgatcagccggctcgaaagcatggtgatgatggcgaacgcgaacctgcagctg
ctgtcgatccggcgccagatcgcgagcgccgtgcacctgttcgtgcagatcgagcgaatg
cgcgacggcgtgcgtcgcgtgacgcggatcaccgagatcgtcgggatggaaggcgaggtc
gtgatcacgcaggatctgttcacgttccgccaggacagcgacacgacgcgcgacgtggtg
aaaggggtgttcgaggcgtcgtcgctgcgccccgcgttcgccccgcgtgccgcgtactac
ggcatggaggacgcgctctccgaggtattccggcaatga

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