Burkholderia ambifaria AMMD: Bamb_3579
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Entry
Bamb_3579 CDS
T00398
Name
(GenBank) protocatechuate 3,4-dioxygenase, beta subunit
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam00362
Benzoate degradation
bam01100
Metabolic pathways
bam01120
Microbial metabolism in diverse environments
bam01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Bamb_3579
00624 Polycyclic aromatic hydrocarbon degradation
Bamb_3579
Enzymes [BR:
bam01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
Bamb_3579
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ABI89133
UniProt:
Q0B9P0
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All DBs
Position
2:complement(403379..404086)
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AA seq
235 aa
AA seq
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MDSPTILTPRDWPSHPAYVHPEYRSSVKRGPTRPMIPLKEKLRDQYAPVYGAEDLGALDH
DLTKNSVKNGEPLGERIVVTGRVLDEGGKPVRNTLVEVWQANAAGRYVHKVDQHDAPLDP
NFLGAGRCLTDNEGRYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGDYFGSRLVTQMYFP
GDPLLAYDPIFQGTPEAARDRLISRFSMDITEEGYALGYEFDIVLRGRDATPMER
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggattcccccacgatcctcacgccgcgcgactggccgtcgcatcccgcatatgtccac
cccgagtaccgttcgtcggtgaagcgcggcccgacgcgcccgatgatcccgctgaaggaa
aagctgcgcgaccagtacgcgcccgtctacggtgcggaggatctcggcgcgctcgaccac
gacctgacgaagaactcggtgaagaacggcgagccgctcggcgaacgcatcgtcgtcacc
gggcgcgtgctcgacgaaggcggcaagcccgtgcgcaacacgctcgtcgaggtatggcag
gcgaacgccgccggccgctacgtgcacaaggtcgaccagcacgacgcgccgctcgatccg
aacttcctcggcgcgggccgctgcctgaccgataacgaaggccgctaccgcttcctgacg
atcaagcccggcgcctatccgtggggcaaccatccgaacgcgtggcgcccgaatcacatc
cacttctcgctgttcggcgactacttcggctcgcgcctcgtcacgcagatgtacttcccc
ggcgatccgctgctcgcgtacgacccgatcttccagggcacgccggaagccgcgcgcgat
cgcctgatctcgcgcttctcgatggacatcaccgaagaaggctatgcgctcggctacgaa
ttcgacatcgtgctgcgcggccgcgacgctaccccgatggagcgctga
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