Burkholderia ambifaria AMMD: Bamb_3686
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Entry
Bamb_3686 CDS
T00398
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam00100
Steroid biosynthesis
bam00909
Sesquiterpenoid and triterpenoid biosynthesis
bam01100
Metabolic pathways
bam01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Bamb_3686
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Bamb_3686
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bam01006
]
Bamb_3686
Enzymes [BR:
bam01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Bamb_3686
Prenyltransferases [BR:
bam01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Bamb_3686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ABI89240
UniProt:
Q0B9D3
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All DBs
Position
2:535692..536756
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AA seq
354 aa
AA seq
DB search
MTTHTDPAYLLGDLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVAPER
RAALLTDLRDEIERLGDGAALSRALEDVTRMQTDSHEHMLLASMKPMLALLRAQPDADRA
SIRKVVATLTSGMEFDLRTFPDEQSGQVASLPSRDELDRYTYLVAGCVGEFWTDMTGAHT
RAARGWDFADMREKGIRFGKALQMTNILRDCAKDLRIGRCYLPDDVLAEHRIGVADLMSP
DASARARGVLVELLRATLAQYRDACFYTQAIPRRFVRLRLACLWPIMIGLETLELLAGHD
AWLDPARPAKVPRKRVYRIMASSLALVGSNAAIRARINALVDAVNARIAAPASH
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgacgactcataccgatcccgcctacctgctcggcgacctgctgaagaacgtttcccgc
tccttttacctgacgctgcgcgtgctgcccgacggcatgcgcgagccggtcggcctggcc
tatctgctcgcgcgcgcggccgacacgatcgccgacacggcgctcgtcgcgcccgagcgt
cgcgcggcgctgctgaccgacctgcgcgacgagatcgagcggctcggcgacggcgcggcg
ctgtcgcgcgcgctcgaggatgtcacgcggatgcagacggattcgcacgaacacatgctg
ctcgcgtcgatgaagccgatgcttgcgttgctgcgcgcgcagccggacgcggaccgcgca
tcgatccgcaaggtcgtcgcgacgctgacgtcggggatggagttcgacctccgcacgttc
cccgacgagcagtcggggcaggtcgcgtcgctgccgagccgtgacgaactcgatcgctac
acgtatctggtcgccggctgcgtcggtgaattctggaccgacatgaccggcgcgcacacg
cgggccgcgcgcggctgggatttcgcggacatgcgcgagaagggcatccgtttcggcaag
gcgctgcagatgaccaacatcctgcgcgactgcgcgaaggacctgcggatcggccgctgc
tacctgccggacgacgtgctggccgagcatcgcatcggcgtcgccgacctgatgtcgccc
gacgcgtcggcgcgcgcgcgcggcgtgctggtcgagctgttgcgcgcgacgctcgcgcag
tatcgcgacgcgtgcttctatacgcaggcgattccgcgccgcttcgtgcgtctgcggctc
gcgtgcctgtggccgatcatgatcggcctcgaaacgctcgaactgctggccggccacgac
gcgtggctcgatccggcgcggccggcgaaggtgccgcgcaagcgcgtctaccggatcatg
gcgtcgtcgctcgcgctcgtcggttcgaacgcggcgatccgtgcgcgcatcaacgcgctg
gtcgacgcggtgaacgcgcggatcgcggcccccgcgtcgcattga
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