Burkholderia ambifaria AMMD: Bamb_3871
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Entry
Bamb_3871 CDS
T00398
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
bam
Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bam02000
]
Bamb_3871
Transporters [BR:
bam02000
]
Other transporters
Pores ion channels [TC:
1
]
Bamb_3871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
NtrZ
PhiKZ_MCP
Motif
Other DBs
NCBI-ProteinID:
ABI89425
UniProt:
Q0B8U8
LinkDB
All DBs
Position
2:761646..763727
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AA seq
693 aa
AA seq
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MRDLPRLPLRPLSPVSLMLFAAVAQAQAADTPASPTPTQTTPLAPIFVTANPLGDTQLIA
PTAQLSGDALTRRQADSLGETLNGLPGVSTTTYGPMVGRPIIRGMDGDRIRLLQNGVAAY
DASSLSYDHAVPQDPLSIERVEIVRGPAALLYGGNAVGGVVNTIDNRVPREAIEGVTGAL
DARYGGANSVRAGAAQVEGGNGRFAFHVDAFDREASKLRIPGYARSGAQRAIDGPDTPQP
YGNVPNSDGRVHGGAAGASYTWADGFAGLSYSGYESNYGSVAEDDVRLRMRQERLAFASE
VRNLSGPFTKVKFDFAYTDYRHKEVDNGETATTFRNRGYEARIEARHRKIGPFEGAIGVQ
FGRNTFSALGDELLVPSTRTNSVALFGLEEWQVDPALKLSLGGRFEHVKVDPDPAGVEKF
AGAQPRDFNAGSVSAGALFSLTPVWSVAANVAYTERAPTFYELYSNGPHDATGQFLIGNP
NASKEKAVSTDLSLRYASGPNRGSVGVFYNRFSNYLTEYNTGRVVDDDGEPVAPGADGSL
NEAIYRGVRAEFYGVELDGKWRAFSRRGHTVDLELTADYTHARNVDTGQPLPRIAPLRAT
LAADYGYGPFGARAQVTHAWSQHRVPDNDFSTDGYTSLGVMLTYKFRVGATHWLTYLRGD
NLTNQEIRYATSVVRGFAPQGGRSVMAGLRTTF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacctccctcgtctaccgcttcgcccgctctctcccgtttcgctgatgctgttc
gccgccgtcgcacaagcccaggccgccgatacgcccgcctcgccaaccccgacgcagacc
acgccgctcgcgccgatcttcgtgaccgcgaacccgctgggcgacacccaattgatcgca
ccgaccgcgcaactgtccggcgacgcgctgacgcgccgccaggccgattcgctcggcgag
acgctcaacggcctgcctggcgtgtcgaccaccacctacggcccgatggtcggccgtccg
atcatccgtgggatggacggcgaccggatccggctgctgcagaacggcgtcgccgcctac
gacgcatcgtcgctgtcgtacgaccacgcggtgccgcaggacccgctgtcgatcgagcgc
gtcgagatcgtgcgcggcccggccgcgctgctgtacggcggcaacgcggtcggcggcgtc
gtcaacacgatcgacaaccgggttccgcgcgaggcgatcgaaggcgtgacaggtgcgctg
gatgcacgctacggcggcgcgaactcggtgcgcgccggcgccgcgcaggtcgaaggcggc
aacggccgcttcgcgttccatgtcgacgcattcgaccgcgaggccagcaagctacggatt
cccggctatgcgcgcagcggcgcgcaacgcgcgatcgacggccccgacacgccgcagccg
tacggcaacgtaccgaacagcgacggccgcgtgcacggcggcgccgccggcgcgtcgtac
acgtgggccgacggtttcgcgggcctgtcgtacagcggctatgaatcgaactacggctcc
gtcgccgaggacgacgtgcgcctgcgcatgcgccaggaacggctcgcgttcgcgtccgag
gtgcgcaatctgagcggcccgttcacgaaagtgaagttcgacttcgcgtacaccgactac
cgccacaaggaagtcgacaacggcgagacggcgaccaccttccgcaaccgcggctacgaa
gcgcgcatcgaggcgcggcatcgcaagatcggtccgttcgaaggcgcgatcggcgtgcag
ttcggccggaacacattctcggcgctcggcgatgaactgctggtgccgtcgacgcgcacg
aacagcgtcgcgctgttcggcctcgaggaatggcaggtcgacccggcgctgaagctgagt
ctcggcgggcgcttcgagcacgtgaaggtcgatcccgatccggccggcgtcgagaaattc
gcgggcgcgcagccgcgcgacttcaacgccggcagcgtatcggccggcgccctcttctcg
ctgacgcccgtgtggtcggtcgcggcgaacgtcgcctacacggagcgtgcgccgaccttc
tacgagctgtactcgaacggcccgcacgacgcgaccggccagttcctgatcggcaacccg
aacgcgtcgaaggaaaaggccgtgtcgaccgacctgtcgctgcgctatgcgagcggccct
aaccgcggcagcgtcggggtgttctacaaccgcttctcgaactacctgaccgagtacaac
acgggccgcgtcgtcgacgacgacggcgaaccggtcgcacccggcgccgatggctcgctc
aacgaagcgatctatcgcggcgtgcgcgccgagttctacggcgtcgaactcgacggcaag
tggcgcgcgttctcgcggcgcggccatacggtcgatctggaactgaccgccgactacacg
catgcacgcaacgtcgacaccggccagccgctgccgcgcatcgcgccgctgcgcgcgacg
ctcgcggccgactacggttacggcccgttcggcgcacgcgcgcaggtcacgcatgcgtgg
tcgcagcaccgcgtgcccgacaacgacttttcgacggacggctacacgtcgctcggcgtg
atgctcacgtacaagttccgtgtcggcgcgacacactggctcacgtacctgcgcggcgac
aacctgacgaaccaggaaatccgctacgcgacctcggtcgtgcgcggctttgctccgcag
ggcggccgcagcgtgatggccgggttgcgcacgacgttctga
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