Burkholderia ambifaria AMMD: Bamb_3886
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Entry
Bamb_3886 CDS
T00398
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
bam
Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bam02000
]
Bamb_3886
Transporters [BR:
bam02000
]
Other transporters
Pores ion channels [TC:
1
]
Bamb_3886
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABI89440
UniProt:
Q0B8T3
LinkDB
All DBs
Position
2:778950..780878
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AA seq
642 aa
AA seq
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MNLRHLLATSAATALLSPIAHAAGDTTITQPRPSADGTDLPTIAVTDTRHLPESFDQRYA
TTQVLTRADLDRLSPSEPSITQALAMLPGVTVSQTGGPGSSASVSIRGSSASQVAVFIDG
IRIGSPTTGIAPWADLPTEAFERVEVISGPAAASFGANAMGGVVQLFTRRAAGQPNQTSV
SFGGGSNKTFDTQLRTSGTVPSTGPLAALGGLTYSLGLHSYNTAGIDATRPVLPYHEDGR
NPYHAQDLDARLGYARDNWSISTFALYHRSDLSYDNAGYANRELDHQLTTGIAFHLDITP
DTQFDQSFGYANDRQFLYASDPAIQTDRIDSQRISSSTSLTHQTHGFHLFGLPLSGETKV
AYDFTREQAFLPIDVPDGVPTRNDSAFSLHQSATLGSVTMFVAGRHEIIAGKAVNTGNAA
LSWAITPVYTARVSYGNAFRLPSFNDLYYPGYGNPNLNPERSDSVEAALDANTAYGTFSA
AIYDTRVNNLIAYNPATFSPMNIGRAHIRGIDLSYKGTLGRTTPVSIAVGILNPQDETND
SWLSRRPRQTVSVNIDHTWDELHLHALSTGASLNYGGTTFDDPANATYLPSYLTVNLRAS
YKINAHLTVSATLSNLFDRQYVTAYGYNTLGRTAFGKVSYTF
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcgccaccttctcgccacgtccgccgccaccgcgctgctctccccgatcgcc
cacgccgccggcgatacgacaatcacgcagccgcgcccgtccgcggacggcaccgacctg
ccgacgatcgccgtgaccgacacgcggcatctgcccgaatcgttcgaccagcgctatgca
acaacgcaggtgctcacgcgcgccgatctcgaccgtctgtcgccgagcgagccgagcatc
acgcaggccctcgcgatgctgccgggcgtgaccgtctcgcagaccggcggccccggctcg
tccgcgtcggtcagcatccgcggctcgtcggccagccaggtcgcggtattcatcgacggg
atccggatcggctcgccgaccaccggcatcgcgccgtgggccgacctgccgaccgaagcg
ttcgagcgcgtcgaagtgatttcggggccggccgccgcatcattcggcgcgaacgcgatg
ggcggcgtcgtgcagctgttcacgcgccgcgccgccggccagcccaaccagacgagcgtg
tcgttcggcggcggctcgaacaagaccttcgacacgcagttgcgcacgtcgggcaccgtg
ccgtcgacggggccgctggccgcgctcggcgggctcacctactcgcttggcctgcactcg
tacaacaccgccggcatcgacgcgacgcggcccgtgttgccgtaccacgaggacggccgc
aatccgtaccacgcgcaggatctcgatgcgcgcctcggttacgcgcgcgataactggtcg
atctcgacgttcgcgctgtatcaccgctccgacctgtcctatgacaacgccggctatgcg
aaccgcgaactcgatcatcagctgacgaccggcatcgcgttccatctcgacattacgccc
gacacgcagttcgaccagtcgttcggttatgcgaacgaccgccagttcctgtatgcgagc
gacccggccatccagaccgaccggatcgactcgcagcgcatcagttcgtcgacgtcgctg
actcatcagacgcacggcttccacctgttcggcctgccgctgtcgggcgagacgaaggtc
gcatacgacttcacgcgcgagcaggcgttcctgccgatcgacgtgccggacggcgtgccc
acgcgcaacgattccgcgttctcgctgcatcagtcggcgacgctcggcagcgtgacgatg
ttcgtcgcggggcgtcacgagatcatcgcggggaaagccgtgaacaccggcaacgccgcg
ctgtcgtgggcgatcacgccggtctatacggcgcgcgtgtcgtacggcaacgcattccgc
ctgccgtcgttcaacgacctgtactaccccggctacggcaatccgaacctgaatccggag
cgcagcgattcggtcgaagccgcgctcgacgcgaacacggcgtacggcacgttcagcgcc
gcgatctacgacacgcgcgtcaacaacctgatcgcgtacaacccggcgacgttctcaccg
atgaacatcggccgtgcgcatatccgcggcatcgacctgtcgtacaagggcacgctcggc
cgcacgacgccggtgagcatcgcggtggggattctcaatccgcaggacgaaaccaacgac
agctggctcagccgccggccgcgccagacggtcagcgtgaacatcgaccacacgtgggac
gaactgcacctgcatgcactgagcaccggcgcgtcgttgaactacggcggcacgacgttc
gacgacccggccaacgccacgtatctgccgtcgtatctgaccgtgaatctgcgcgcgtcg
tacaagatcaatgcgcacctgacggtgtcggcgacgctgtcgaatctgttcgaccgtcag
tacgtgaccgcgtatgggtacaacacgcttggccgcactgcgttcggtaaggttagctat
acgttctga
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