Burkholderia ambifaria AMMD: Bamb_4004
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Entry
Bamb_4004 CDS
T00398
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K16053
miniconductance mechanosensitive channel
Organism
bam
Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bam02000
]
Bamb_4004
Transporters [BR:
bam02000
]
Other transporters
Pores ion channels [TC:
1
]
Bamb_4004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
FA_desaturase
Motif
Other DBs
NCBI-ProteinID:
ABI89557
UniProt:
Q0B8G6
LinkDB
All DBs
Position
2:915182..916543
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AA seq
453 aa
AA seq
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MHSPHTPGTRWHNHGPFMCPSSGARRIAAQIQRTRKTLPALMTLNESWFAPLVGLLILLA
AAGAITAAVHFLLFRVVARLARLSATRIDDALFEFGAFKWLNRIVPFVVIKLGLAAVPGI
PAAAAQAADKVLFALIVLLLSMTISATLSALEHTHRMSHRDQPRLSLKGAMQLVKLVMFI
TAALVVIGDATGKQIGLLLSGIGAMSAVLMLIFKDTLLGLVAGVQLSSNDMLRIGDWITM
PSAGADGTVIDITLNTVKVANFDHTIITVPTWKLITESYQNWRGMTEAGGRRIKRALFID
ATSVRFLDNDEIARLERLTLLKDYLEDKVDAIAQWNGTLGTAGECPANRRQLTNLGTFRA
YVANYLKGHPRIRRDMTCMARQLPLTAEGIPLELYCFTDTTSWVDYETIQADLFDHLIAV
LPEFGLRVYQHPSGFDMRRMAGVAQGEQAPHAQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcattcgccgcacacacccggaacccgatggcacaatcacggtcctttcatgtgccct
tcatcgggcgcgcgccgcatcgcggcgcagattcaacgcacgagaaagaccctgcctgcc
cttatgaccctgaacgaatcctggtttgcgccgctcgtcggcctcctcatcctgctcgcc
gccgccggcgcgatcaccgccgccgtccatttcctgctgttccgcgtggtcgcgcgcctc
gcgcggctatcggcaacgcgcatcgacgacgcgctcttcgaattcggcgcattcaagtgg
ctgaaccgcatcgtgccgttcgtcgtgatcaagctcgggctcgcggcagtgcccgggatt
ccggccgcggccgcgcaggccgccgacaaggtgctgttcgcgctgatcgtgttgctgctg
tcgatgacgatcagcgcgacgctgtccgcgctcgaacacacgcatcgcatgagccatcgc
gaccagccgcgcctgtcgctcaaaggcgcgatgcagctcgtcaagctcgtgatgttcatc
acggccgcgctcgtcgtgatcggcgacgcgaccggcaagcagatcggcctgctgctgtcg
ggcatcggcgcgatgtcggcggtgctgatgctgatcttcaaggacacgctgctcggcctc
gtcgccggcgtgcagctgtcgtcgaacgacatgctgcgaatcggcgactggatcacgatg
ccgtcggccggcgcggacggcaccgtcatcgacatcacgctgaatacggtgaaggtcgcg
aacttcgatcacacgatcatcacggtgccgacgtggaagttgatcaccgagagctatcag
aactggcgcgggatgaccgaagccggcgggcgccgcatcaagcgcgcgctgttcatcgac
gcgacgagcgtccgctttctcgacaacgacgagatcgcacggctcgaacgcctgacgctg
ctgaaggactacctggaagacaaggtcgacgcgatcgcgcaatggaacggcacgctcggc
acggcgggcgaatgcccggcgaaccgccgccagctgacgaatctcggcacgttccgcgcg
tacgtcgcgaactacctgaagggccatccgcgaatccgccgcgacatgacgtgcatggcg
cgccagctgccgctgacggcggaaggcattccgctcgaactgtactgcttcaccgacacg
acgagctgggtcgactacgagacgatccaggccgacctgttcgatcacctgatcgcggtg
ctgccggaattcgggctgcgcgtgtaccagcacccgtcgggcttcgacatgcgccggatg
gccggcgtggcgcaaggcgaacaggcgccgcacgcgcagtaa
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