KEGG   Burkholderia ambifaria AMMD: Bamb_4227
Entry
Bamb_4227         CDS       T00398                                 
Name
(GenBank) type III secretion apparatus protein, YscD/HrpQ family
  KO
K03220  type III secretion protein D
Organism
bam  Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:bam00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bam02044]
    Bamb_4227
Secretion system [BR:bam02044]
 Type III secretion system
  Type III secretion core apparatus
   Bamb_4227
SSDB
Motif
Pfam: Yop-YscD_cpl Y4YQ_C T2SSB BON T2SSC
Other DBs
NCBI-ProteinID: ABI89780
UniProt: Q0B7U3
LinkDB
Position
2:complement(1148661..1150019)
AA seq 452 aa
MSTTIIEPHGDGTVPGGAAAGAAALASPWNLCFLSGPMYGRTMSLARGANWVGTAADCEV
ILPDREIGAKQVCLQVGALAVTVQNHGGDGGAPVLFNDEPLGAGRRSMTPQDVVTVGSIK
LGIARHAQASVAVPDEADAPDAAREAAWLGWLTGGLRRLGSRRLVIALVALWIGVLLGAL
GYGFVAWSGRLPWQHESVLARTHRLQQQLHAYPELAVAPRDDGVIVSGYVSDAAARERVA
QIVAGVDNAALGNIYVVSDLVATAQTYFSDTALTVTYLGRGRIELTGAAERAQIEPRIRN
YMKDARPALEVVDHVRDADAAAPRTATTLGGVAGIPEITTVFAGDGDQRYIETVDGSRYF
EGARLKEGPTVVSIGPDEVVFERNGQRITMPLGGSSASAPGQAPAPPVPPLASGAAAGVA
QPVPGPTLLPAAPAAPAGASVAAAGALKGAAH
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtcgacgaccatcattgagccgcacggcgacggcacagtgcccggcggcgcggcggcc
ggggcggccgcactcgcgtcgccgtggaacctgtgctttctcagcgggccgatgtacggc
cgcacgatgtcgctcgcgcgcggcgcgaactgggtcggcaccgcggccgattgcgaagtg
atcctgcccgatcgcgagatcggcgcgaaacaggtatgcctgcaggtcggcgcgctcgcg
gtgaccgtgcagaaccacggcggcgacggcggcgcaccggtgctgttcaacgacgagccg
ctcggcgcgggccgccgctcgatgacgccgcaggacgtcgtgacggtcggttccatcaag
ctcggcatcgcgcgtcatgcgcaggcgagcgtcgcggtgcccgacgaggccgacgcgccg
gacgccgcgcgcgaggccgcatggctcggctggctcaccggcgggctgcggcgtctcggc
agccggcggctcgtgatcgcgctcgtcgcgttgtggatcggcgtgctgctcggcgcgctc
ggctatggcttcgtcgcgtggtcgggccgcctgccgtggcagcacgaatcggtgctcgcg
cgcacgcaccggctgcagcagcagctgcatgcgtatccggaactcgccgtcgcgccgcgc
gacgacggcgtgatcgtgtcgggctacgtgagcgatgctgccgcgcgcgaacgcgtcgcg
cagatcgtcgcgggcgtcgacaacgcggcgctcggcaacatctacgtcgtgagcgatctc
gtcgcgaccgcgcagacatatttcagcgacacggcgctgacggtcacctatctcggccgc
ggccggatcgaattgacgggggcggccgagcgcgcgcagatcgagccgcgcatccgcaac
tacatgaaggacgcgcgcccggcgctggaggtggtcgaccatgtgcgtgacgccgatgcg
gctgcgccgcgcaccgcgacgacgctcggcggtgtcgccgggattccggagatcacgacc
gtgttcgcgggcgacggcgatcagcgttatatcgagaccgtcgacggcagccgctacttc
gaaggcgcgcggctgaaggaagggccgacggtcgtgtcgatcgggccggacgaagtggtg
ttcgagcgcaacgggcagcgcatcacgatgccgctcggcggttcgtccgcgagcgcgccc
gggcaggcgccggcgccgcccgtgccgccgctcgcgagcggtgcggcggccggggtcgcg
cagccggtgccggggccgacgctgttgccggcggcaccggcggcaccggcaggcgcgtcc
gtcgcggccgccggcgcattgaaaggagcggcgcactag

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