Burkholderia ambifaria AMMD: Bamb_4497
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Entry
Bamb_4497 CDS
T00398
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam00260
Glycine, serine and threonine metabolism
bam00460
Cyanoamino acid metabolism
bam00630
Glyoxylate and dicarboxylate metabolism
bam00670
One carbon pool by folate
bam00680
Methane metabolism
bam01100
Metabolic pathways
bam01110
Biosynthesis of secondary metabolites
bam01120
Microbial metabolism in diverse environments
bam01200
Carbon metabolism
bam01230
Biosynthesis of amino acids
bam01240
Biosynthesis of cofactors
bam04981
Folate transport and metabolism
Module
bam_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bamb_4497
09102 Energy metabolism
00680 Methane metabolism
Bamb_4497
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bamb_4497
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Bamb_4497
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Bamb_4497
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Bamb_4497
Enzymes [BR:
bam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Bamb_4497
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ABI90047
UniProt:
Q0B726
LinkDB
All DBs
Position
2:complement(1445304..1446578)
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AA seq
424 aa
AA seq
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MSNTQPFFSQPLAERDAPVRSAILKELERQQSQVELIASENIVSRAVLEAQGSVLTNKYA
EGYPGKRYYGGCEFADEVEALAIERVKQIFNAGYANVQPHSGAQANGSVMLALAKPGDTV
LGMSLDAGGHLTHGAKPALSGKWFNAVQYGVNRDTLRIDYDQVEELAHQHKPNLIIAGFS
AYPRALDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPR
GGFVLTNDEDIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEVLHADFKTYIDNVLANAQA
LGEVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAPVEQALERAGITCNKNGIPFDTEKPT
VTSGIRLGTPAGTTRGFGVAEFREVGRLILEVFDALRANPEGDAATEQRVRREIFALCER
FPIY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacacccagcctttcttctcgcagccccttgccgagcgcgacgcgccggtgcgc
agcgccatcctgaaggagctcgagcgccagcagtcgcaggtcgagctcatcgcgtcggaa
aacatcgtgtcgcgtgcggtgctggaggcgcagggttcggtgctgaccaacaagtatgcg
gaaggctatccgggcaagcgttactacggcggctgcgaattcgcggacgaagtcgaggcg
ctggcgatcgagcgcgtgaagcagatcttcaacgccggctacgcgaacgtgcagccgcac
tcgggcgcgcaggcgaacggctcggtgatgctcgcgctggcgaagccgggcgacacggtg
ctcggcatgtcgctggacgccggcggtcacctgacgcacggcgcgaagccggcgctgtcg
ggcaagtggttcaacgcggtgcagtacggcgtgaaccgcgacacgctgcggatcgactac
gaccaggttgaagaactcgcgcaccagcacaagccgaacctgatcatcgcaggcttctcg
gcgtatccgcgcgcactggacttcgctcgctttcgcgcgatcgccgacagcgtcggcgcg
aagctgatggtcgacatggcgcacatcgcgggcgtgatcgccgccggccgccatgcgaac
ccggtcgagcacgcgcacgtcgtcacgtcgaccacgcacaagacgctgcgcggcccgcgc
ggcggcttcgtgctgaccaacgacgaagacatcgcgaagaagatcaactcggccgtgttc
cccggcctgcagggcggcccgctgatgcacgtgatcgccggcaaggccgtcgcgttcggc
gaagtgctgcacgcggacttcaagacctacatcgataacgtgctcgcgaacgcgcaggcg
ctcggcgaagtgctgaaggcgggcggcgtggatctcgtcaccggcggcaccgacaaccac
ctgctgctggtcgacctgcgcccgaagggcctgaagggcgcgccggtcgagcaggcgctg
gagcgcgcgggcatcacctgcaacaagaacggcattccgttcgacaccgagaagccgacc
gtcacgtcgggcatccgcctcggcacgccggccggcacgacgcgcggcttcggcgtcgcg
gagttccgcgaggtcggccgcctgattctcgaagtgttcgacgcgctgcgcgcgaacccg
gaaggcgacgccgcgaccgaacagcgcgtgcgccgcgagattttcgcgctttgcgagcgc
ttcccgatttactga
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