Burkholderia ambifaria AMMD: Bamb_4843
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Entry
Bamb_4843 CDS
T00398
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
bam
Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bam03000
]
Bamb_4843
Transcription factors [BR:
bam03000
]
Prokaryotic type
Helix-turn-helix
Other families
Bamb_4843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS
AAA_2
AAA
PAS_4
AAA_3
AAA_16
PAS_8
AAA_7
nSTAND3
IstB_IS21
DUF6262
TIP49
Motif
Other DBs
NCBI-ProteinID:
ABI90392
UniProt:
Q0B631
LinkDB
All DBs
Position
2:1841241..1843223
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AA seq
660 aa
AA seq
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MDLSSTKPVGPADRTVRPRIWAMGISRLRDLFREIAGEFDERADVRIVTRAYEDALSAIA
EAGTARPDVIVAAGSNGGFLKTRAQVPVVVVSPTGFDVMQALARARRDASRIALVSAGET
PPEVRRFVAAYGLDVQFASYQSAQEAEACVHDLHDRGIETIVGPGLVTDLAASAGMGAVF
LYSHASVRKAVETALEVAYATHAEAFRRQRLDNLLQHLRDGVVALDARGHVEAINERLAS
ALGVEPAAAVGRALVDLRPELRTLRGEDGDALATVRGVRYVVHRGPLVDRGVTSGSVLTF
QESRAVERLDRALRSQPNTQQFAARYALDDVVGASAPMARVRDLVRRYAKSDATVLVLGE
SGTGKEMIAQSLHALSVRRSYPFVAINCGAFPEALLESELFGYEEGAFTGARRGGKTGLF
EAAHRGTLFLDEIGEMPPSLQSRLLRVLQEREVIRLGSTEPIRIDVRVIAATHRPLLAAV
EAGTFRADLYYRLNILNIGLPPLRERAADIPALAATLLVQAARREPRLAERVREVDDAMR
VLGATQATLARYRWPGNVRELQNVVERIAVELAEEVDEQDPGAPCAALAPDALQAIAPEL
FATPPEAADPDDAQTLQARRRRAEADEIRAVLDACGGDRDRACAMLGISKTTLWRKLSAK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacctctcctcgaccaagcccgtcggcccggccgaccgcacggtacgcccgcgcatc
tgggcgatgggcatcagccgcctgcgcgacctgtttcgcgagatcgccggtgaattcgac
gaacgcgccgacgtgcgcatcgtcacgcgggcctacgaagacgcgctgagcgcgatcgcg
gaagccggcaccgcgcggcccgacgtgatcgtcgcggccggctcgaacggcggcttcctg
aaaacgcgtgcgcaggtgccggtggtagtcgtgtcgccgaccggcttcgacgtgatgcag
gcgctcgcgcgcgcacggcgcgacgcgtcgcggattgccctcgtcagcgccggcgagacg
ccgccggaggtgcgccgcttcgtcgccgcctacggcctcgacgtgcagtttgcgtcatat
cagtccgctcaggaagcggaagcctgcgtgcacgacctgcacgaccgcggcatcgagacg
atcgtcggccccggcctcgtcaccgatctcgcggcgagtgccggcatgggcgcggtgttc
ctgtattcgcacgcgtcggtgcgcaaggcggtcgaaacggcactcgaagtcgcgtacgcg
acgcacgccgaggcgtttcgccgtcagcgcctcgacaacctgttgcagcacctgcgcgac
ggcgtggtcgcgctcgacgcgcgcggtcacgtcgaggcgatcaacgagcggctcgcgtcg
gcgctcggggtcgaaccggcggcggccgtcggccgcgcgctcgtcgacctgcggcccgag
ctgcgcacgctgcgcggcgaggatggcgacgcgctcgcgacggtgcgcggcgtgcgctac
gtcgtgcatcgcgggccgctcgtcgatcgcggcgtcacgtcgggcagcgtgctgaccttc
caggaatcgcgcgcggtcgaacggctcgaccgcgcgctgcgttcgcagccgaatacgcag
cagttcgcggcgcgctacgcactcgacgacgtggtcggcgcgtccgcgccgatggcgcgc
gtgcgcgacctcgtgcgccgctacgcgaaatccgacgcgaccgtgctcgtgctcggcgag
agcggcaccggcaaggagatgatcgcgcagagcctgcacgcgctgtccgtgcggcgcagc
tatccgttcgtcgcgatcaactgcggcgcgtttccggaagcgctgctcgagagcgagctg
ttcggttatgaggaaggcgcgttcaccggcgcccggcgcggcggcaagaccgggctgttc
gaggccgcgcaccgcggcacgctgtttctcgacgagatcggcgagatgccgccgtcgctg
caaagccgactgctgcgcgtgctgcaggagcgtgaggtgatccgcctcggttcgaccgag
ccgatccgcatcgacgtgcgcgtgatcgccgcgacgcaccggccgctgctcgcggccgtc
gaagccggcacgttccgcgcggacctgtattaccggctcaacatcctgaacatcggcctg
ccgccgctgcgcgagcgcgcggccgacattccggcgctcgcggccacgctgctcgtgcag
gccgcgcggcgcgagccgcggctggccgaacgcgtgcgcgaggtcgacgacgcgatgcgc
gtgctcggcgcgacgcaggcgacgctcgcccgctaccgctggcccggcaacgtgcgggaa
ttgcagaacgtggtcgagcggatcgcggtggaactggccgaggaagtcgacgagcaggat
ccgggcgccccgtgcgccgcgctcgcgcccgacgcgctgcaggcgatcgcgccggagttg
ttcgcgacaccgcccgaggccgccgatcccgacgacgcgcagacactgcaagcacgccgc
cgccgcgcggaagccgacgagatccgcgcggtgctcgatgcgtgcggcggcgaccgcgat
cgcgcgtgtgcgatgctgggcatcagcaagacgacgctgtggcggaagctttcggcgaag
tag
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