Burkholderia ambifaria AMMD: Bamb_5007
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Entry
Bamb_5007 CDS
T00398
Name
(GenBank) transcriptional regulator, LysR family
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
bam
Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bam03000
]
Bamb_5007
03036 Chromosome and associated proteins [BR:
bam03036
]
Bamb_5007
Transcription factors [BR:
bam03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Bamb_5007
Chromosome and associated proteins [BR:
bam03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Bamb_5007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
P22_Cro
HTH_AsnC-type
HTH_28
EACC1
MarR_2
HTH_24
Fe_dep_repress
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ABI90556
UniProt:
Q0B5L7
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All DBs
Position
2:2027836..2028729
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AA seq
297 aa
AA seq
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MLDYALLDALAAVIRHGSFERAAKELNVTPSAVSQRVKLLEERVGSVLVKRGQPCVATTS
GALLCRHTERVQLLEAELGGRMPALPGQIASAWPTLRVAVNDDSVATWFIDAVGPFCTER
ETLLDLVIDDQDHTAARIRDGSVQGAVTAQAEPIQGCRSTRLGRIRYRAVCSPAFYDRYF
GAGITRDALRRAPCVMFNPKDGLQARFIRRVTRADLDPPQHWIPHVAGYLRACETGLGWG
MCPDRMVDRQLAAGELVDMSRGRTVDIELYWQSWRLSIGWLDDFSAALKTRAALFLD
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctcgactacgcgttgctcgacgccctggccgcggtgatccggcacggttcattcgaa
cgggcggccaaggagctgaacgtcacgccgtcggcggtatcgcagcgcgtgaagctcctg
gaggagcgcgtcggcagcgtgctcgtcaagcgcgggcagccgtgcgtcgcgacgacgtcc
ggcgcgcttctatgccggcatacggaacgcgtgcagttgctcgaggccgaactgggcggc
cggatgcccgcgttgccgggccagatcgcgagcgcgtggccgacattgcgcgtggccgtc
aacgacgacagcgtcgcgacctggttcatcgacgcggtcgggcccttctgtaccgagcgc
gagaccttgctcgacctcgtgatcgacgaccaggaccatacagccgcgcgcattcgcgac
ggcagcgtgcagggcgcggtgaccgcgcaggccgagccgatccagggatgccggtcgacg
cggctcgggcgcatccgctatcgcgcggtgtgttcgccggcgttttacgaccgctatttc
ggcgccggcatcacgcgcgatgcgctgcgccgcgcgccgtgcgtgatgttcaatccgaag
gacggcctgcaggcgcgcttcatccggcgcgtgacgcgtgcggatctcgatccgccgcaa
cactggatcccgcatgtcgcgggctatctgcgcgcatgcgaaacggggctcggatgggga
atgtgcccggaccggatggtcgatcgccagttggcggcgggcgaactggtcgacatgtcg
cgcgggcggaccgtcgatatcgagctgtactggcagagctggcgcctgtcgatcggctgg
ctcgacgacttcagcgcggcgctcaagacgcgtgccgcgctgtttctcgactga
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