Burkholderia ambifaria AMMD: Bamb_5782
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Entry
Bamb_5782 CDS
T00398
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam00061
Fatty acid biosynthesis
bam00071
Fatty acid degradation
bam01100
Metabolic pathways
bam01212
Fatty acid metabolism
bam02024
Quorum sensing
bam04146
Peroxisome
Module
bam_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Bamb_5782
00071 Fatty acid degradation
Bamb_5782
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Bamb_5782
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bamb_5782
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bam01004
]
Bamb_5782
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bam04147
]
Bamb_5782
Enzymes [BR:
bam01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Bamb_5782
Lipid biosynthesis proteins [BR:
bam01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Bamb_5782
Exosome [BR:
bam04147
]
Exosomal proteins
Exosomal proteins of breast milk
Bamb_5782
Exosomal proteins of breast cancer cells
Bamb_5782
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABI91329
UniProt:
Q0B3E4
LinkDB
All DBs
Position
3:complement(254640..256274)
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AA seq
544 aa
AA seq
DB search
MTKRHWIGSYGSIPAEIDADRHPSVTALLDDAMRRFAARPAFRAFGRTVTYADVDRLSTA
LAAYLQQVAGVRKGDRVAVMLPNVLAFPVVFVALARIGAIQVNVNPLYTAHELEHQLNDA
DVEVAVVCGGSMGTFADVVGRTRIRTVLSVGRGDLGVVDAPAGACDALPPGSIALAHALA
AGESLVVEPVALGGDDLLLLQYTGGTTGLSKGAALSHRNLVANIAQFGAIVPDSRRPGEE
VIVTAIPLYHIFALTVNFLSYFAIGAENWLVANPRDMDGFIDVLKAARPSVFVGVNTLYA
GLVAQPRLNEVDWSRLTLSAGGGAAVIDVISARWKAVTGNFIREGYGLSETSPVVTFNPQ
SIDAFTGTTGLPLPSTDVKLLDDQDREVAIGEAGEICVKGPQVMGGYWRKPDANAAAFTA
DGYFRTGDIGVFDAAGFLKIVDRKKDMIIVSGFNVYPNEVEAVATALPGVAECACIGVPD
ERTGEAVKLFVVPASDAALTDAQIVAHCRANLAAYKVPKLIRLIDRLPKSTVGKILRREL
SRAE
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagagacactggatcggctcgtatggctcgatccccgccgagatcgatgccgat
cgccatccttccgtaaccgcgctgctggacgatgcgatgcgccgcttcgcggcgcgcccc
gcattccgcgcgttcggccgcacggtcacctatgccgacgtcgaccgcctgtcgaccgcg
ctggccgcgtacctgcagcaggtcgcgggcgtacgcaagggcgaccgcgtggccgtgatg
ctgcccaacgtgctcgcctttccggtggtgttcgtcgcgctcgcgcgaatcggcgcgatc
caggtcaacgtgaacccgctctacaccgcgcacgagctcgaacatcagctcaacgacgcg
gatgtcgaagtggccgtggtatgcggcggatcgatgggcacgttcgccgacgtggtcggc
aggacgcgcatacgaaccgtgctgagcgtgggccgcggcgatctcggcgtcgtcgatgcg
ccggccggcgcgtgcgacgcgctgccgccgggctcgatcgcactcgctcacgcgcttgcc
gcgggcgagtcgctcgtggtcgagccggtcgcgcttggcggcgacgatctgctgctgctg
cagtacacgggcggcacgaccgggctgtcgaagggcgccgcgctgtcgcatcgcaacctg
gtcgcgaacatcgcgcagttcggcgcgatcgtgccggattcgcggcggccgggcgaggag
gtcatcgtcacggcgatcccgctgtatcacatcttcgcgctgacggtgaacttcctgtcc
tacttcgcgatcggcgcggagaactggctcgtcgcgaatccgcgcgacatggacggcttc
atcgacgtgctgaaggccgcgcggccgtcggtgttcgtcggcgtcaacacgctgtatgcg
gggctcgtggcccagccgcggctgaacgaagtcgactggtcgcggctgacgctgtcggcc
ggcggcggcgcggcggtgatcgacgtgatctccgcgcgctggaaggcggtgacgggcaac
ttcatccgcgaagggtacgggctgtcggaaacgtcgccggtggtcacgttcaacccgcag
tcgatcgacgcgttcacgggcacgacgggcctgccgctgccgtcgaccgacgtgaagctg
ctggacgaccaggatcgcgaggtggcgatcggcgaagcgggcgagatctgcgtgaaggga
ccgcaggtgatgggcggctattggcgcaagccggacgcgaacgcggccgcgtttaccgcg
gacggctacttccgtaccggcgacatcggcgtgttcgatgcggccggcttcctgaagatc
gttgaccgcaagaaggacatgatcatcgtgtcgggcttcaacgtgtatccgaacgaggtg
gaagcggtggcgaccgcgttgccgggcgtcgccgaatgcgcgtgcatcggcgtgccggac
gagcgcaccggcgaggccgtcaagctgttcgtggtgcccgcgtcggacgcggccttgacc
gacgcgcagatcgtcgcgcattgccgcgcgaacctcgccgcgtacaaggtgccgaagctg
atccgcctgatcgaccggctgccgaagtcgacggtcggcaagatcctgcgccgggaactc
agtcgcgcggagtga
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