KEGG   Burkholderia ambifaria AMMD: Bamb_5871
Entry
Bamb_5871         CDS       T00398                                 
Name
(GenBank) type III secretion outer membrane pore, YscC/HrcC family
  KO
K03219  type III secretion protein C
Organism
bam  Burkholderia ambifaria AMMD
Pathway
bam03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Bamb_5871
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bam02044]
    Bamb_5871
Secretion system [BR:bam02044]
 Type III secretion system
  Type III secretion core apparatus
   Bamb_5871
SSDB
Motif
Pfam: Secretin Secretin_N T3S_SPI-1_N0
Other DBs
NCBI-ProteinID: ABI91417
UniProt: Q0B356
LinkDB
Position
3:complement(346678..348363)
AA seq 561 aa
MRWKASIVDYEAQGKDIKDVLRDFGASQGIPTRIAADVSGTVSGKFHLPPRRFLDTLASS
FGFVWYYDGEVLDITTAAELQSTLVKLDSADTGALRDALDRLRISDERFPIVYDSAQGTA
LVSGPPRYVQMVTNVASRLDNNAAHRSGTQVRVFPLFHAWAHDRTVPIDGRQVTLQGVVA
VLNGIYHPHMAKAADKRGGEGEGGRPAGGVKRNTPINDVNGNAYNGPYIPPPVPSGAAGK
GMFAGLTGQPSPAVAAAVGEPPPPQNTSTAPASDDQLPVIVADQRTNSVVIRDTADRMDQ
YGKLIDRLDVKPQLIEIEAHIIEIDDDALRQLGVDWTAHNSHIDVQTGTGTLGQNTYNGT
LSQNFGQTALAGNVLAAATPVGASVAAVLGDAGRYLMARISALQETKAAKIDASPKVVTL
NNIEAVMDNQTQFFVPVSGYTSGDLYSVSTGISLRVLPMVVEEDGRTRIKLDVAIQDGQL
TDRTVSNLPVIQNSTINTQAFIEEGQALLIAGYRADSATMGVTGVPGLSKIPLIGALFRT
DSRQKSHMERLFLLSPRVISP
NT seq 1686 nt   +upstreamnt  +downstreamnt
gtgcgctggaaggcgtcgatcgtcgattacgaagcgcagggcaaggacatcaaggatgtg
ctgcgcgacttcggcgcgagccagggcatccccacgcgcatcgccgccgatgtgagcggc
accgtgagcggcaagttccatctgccgccgcggcgctttctcgatacgctcgcgtcgtcg
ttcggcttcgtgtggtactacgacggcgaagtgctcgacatcacgacggccgccgaactg
cagagcacgctcgtgaagctcgattcggccgatacgggcgcgctgcgcgatgcgctcgac
cgcctgcgcatctcggacgagcgctttccgatcgtctacgacagcgcgcagggcacggcg
ctcgtgagcgggccgcctcgctacgtgcagatggtgacgaacgtggcctcgcggctcgac
aacaacgcggcgcatcgaagcggcacgcaggtacgcgtctttccgctctttcacgcgtgg
gcacacgaccgcacggtgcccatcgacggccggcaggtcacgctgcagggcgtggtggcc
gtactcaacggcatctaccacccgcacatggccaaggccgccgacaagcgcggcggcgag
ggcgagggcggccgcccggcgggcggcgtgaagcgcaacacgccgatcaacgacgtgaac
ggcaatgcctacaacggcccgtacattccgccgccggtgccgtcgggcgcggccggcaag
ggcatgttcgccgggctcaccgggcagccgtcgccggccgtggcggcggcggtgggcgag
ccgccgccgccgcagaacacgagcacggcgccggcgagcgacgatcaactgcccgtcatc
gtcgcggaccagcgcacgaactccgtcgtgattcgcgatacggccgaccggatggatcag
tacggcaaactgatcgatcgcctcgacgtcaaaccgcaactgatcgagatcgaggcgcac
atcatcgagatcgacgacgacgcgctgcgtcagctcggcgtcgactggaccgcgcacaac
agccacatcgacgtgcagaccggtaccggcacgctcggacagaacacctacaacggcacg
ctctcgcagaacttcggccagaccgcgctggcgggcaacgtgctcgcggcggcaacgccc
gtgggcgcatcggtggccgcggtgctcggcgacgccggccgctatctgatggcacgcatc
tcggcgctgcaggagacgaaggccgccaagatcgacgcgagcccgaaggtcgtcacgctc
aacaacatcgaggccgtgatggacaaccagacgcagtttttcgtgccggtgtcgggatac
acgtcgggcgatctctacagcgtgtcgacgggcatctcgctgcgtgtgctgccgatggtc
gtggaggaggatgggcgcacgcgtatcaagctcgacgtggcgattcaggacggccagctc
accgatcggacggtcagcaacctgccggtgatccagaacagtacgatcaacacgcaggcg
ttcatcgaggaggggcaggcgctgctcatcgccggctatcgcgcggacagcgcgacgatg
ggcgtgactggggtgcccgggctctcgaagattccgttgatcggcgcgctcttcaggacc
gacagccgccagaagagccacatggagcggctcttcctgctgtcgccgcgcgtcatctcg
ccgtga

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