Burkholderia ambifaria AMMD: Bamb_5925
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Entry
Bamb_5925 CDS
T00398
Name
(GenBank) beta-ketoacyl synthase
Organism
bam
Burkholderia ambifaria AMMD
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_36
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
PS-DH
WH_AprA
KAsynt_C_assoc
adh_short
AprA_N
RhiE-like_linker
CurL-like_PKS_C
PKS_DH_N
Acetyltransf_1
Epimerase
Methyltransf_23
Thiolase_N
Motif
Other DBs
NCBI-ProteinID:
ABI91470
UniProt:
Q0B303
Structure
PDB
PDBj
LinkDB
All DBs
Position
3:complement(445799..453733)
Genome browser
AA seq
2644 aa
AA seq
DB search
MPLLSACRELGILAALQAGPVGLTRLGADLRANPGYLRLAFRALHALDCVASDDHETYGA
TARFRACAALPEGIDTLYRIDFDACLGEGTQATRLEPWFALSARGWDSEDTEWAQLLDGA
LTVPLLLALARRGVGRGNGDDDARLDTRVHPALHAMLRDWLAARQWLAPADGLRLNERGR
HLCERALTMGVTASYRPMLMALPELIGGDPRRVLTRDADGHETYVDRTLNVIGSGFQHGK
YFNDMADLVVELFDREPLDAQPRYIVDMGCGDGALLRHLYKAIATRSARGRCLDGYPLLL
IGADYNQRSLDAAGRTLEGLPHLLVHADIGKPQALLDALREHGIDDPDAILHVRSFLDHD
RPLDLTAEPADAAQPAADDHVYVDARGNWLSSARVARDLREHLSRWAGIIGRHGLIVLEV
FALPVRLTREYFSQTESFSFDFYHALSRQALVDAGTFHQALASAGLYPDRESLRRYPSVT
PFSRIVLQRVHPKPFTIRTLQSDDIPALLEIDARCWPEPLRLSREAIEQRHRRFPEGQFV
VEYQGRVVGVLYTQRIDDLDAVLGRRHADYAEAHVANGRYWQLISISAHPDFPSLALGDQ
LLEHALDLAALTAGVETVYGITRCLSFISQSETMEAYIGLRDAHGHPVDPLLRFHHLHGA
SIERVVPGARPEDLDNGGDGVLIRYELSARFRAAGAAALPAAGDECRERDTLEVVSESVR
RIMRVPDSFAADCPLRELGLDSMGLMELRLLLGAAFSIEFDPAAFFSYPTARAIAGHIDA
QRRPADAAASASVGRASFPARPDASRRADASADSTNPGAAAGTRETEVAIVGIALRFPGG
IDTPQAYWRMLDEGRCVIGERPDTRWREYREELAALAPALPQIHRGGFLAEVDRFDAAFF
RITPREAQALDPQQRLLLELVHEAFEQAGIDADTQAGREVGVFLGAYTHDYEALTLRERA
LGEIDAWFGSGTALSTAAGRLAYCFDFRGPTMTIDTACSSSSSAIFSACRSLLDGSASLA
VAASVNLMIGPSLSVAYGRASMLSPDGLCKTFDAGADGYVRGEGGVVLLLKRLDDALADG
DRVHAVIKSAALMQDGRTNGLTAPNGQAQVDVIRRALAQAGCDPADIDYVEAHGTGTRLG
DPVEIQALHEAYCAGVERAAPLSVGSVKTNLGHTEAVSGMAGLVKVVLSMQHRRVPAHLH
LNQPSPLLRLDERNIEIARQARDWQATPGRPRRAGISSFGFSGSNTHLIVEEFVAPEAMP
AAPVAAPLPAVVSAATPAALRANLAALAEYLEASPAPLDLAALSRALTAGRAQHARRVAF
SFDSKEALRERLAQAQAAVDHDAAPRAGLRIAFMYTGQGAQYHGMAQRLAGTSPVFRAHL
ERCAALVREHAGFDLFDLMWGEPRARIDETRYTQVALFCVEHSLALLLREAGIEASVVLG
HSVGEYGAACYAGVMEEAATIRLLSRRGELMHEGTARGAMVALLAPLAEVEALLRGFDRL
AVAALNGPRNQVVAGDSQQLEALVRLAGERQIPAFPLPVERAFHSPLMAPILPGFRELAE
RFAYAAPRATLISNLTGEVCRGAPDAGYWTDHIRQPVRFEHSVRTLLAQEVDLVIEIGPK
PVLTRMAQAVAPAPTLQWLPALVDAERHGLAAIFAKASEAGLAVNWRVYPHESTARLDDL
PLYRFQRESYWLPALGARGAAPGAAREAGAALPDSPSQAGSRVEPNVDAAARTEVRIDPA
LDRAPWAHVIGRHSVFPAGGYLGLAIEAALRWLDRPAGVVLRGLRVEQMLRLAEDGAYRL
EATARPGDPGEGGDPARAAILVRSAGGTGAAWTTHARATAEPLAAGTAASVLAAPADTQA
VAMDGASFYRRVAALGYDYAAPFRGITWLRRAGDSIGADLSAAGTPEPDGYAAAPWRLDH
CLQTVLAARLEALEADGAHLLLPTGVERLVWHGPLPAAPRVVCRVRAHHDGVEAELRITD
AQGKPCCEMEGLRFARVDRRGLAGAGGAASVVSPASAPSRSASPLHALRWRRVDPPSVAA
DEAGRSWLVVSAAGASGGAFAAALGARGARVERLDPRDAHDAAGLAAFARSLADYAAARA
EPFGLIHLHADAAVDLAVVRFLAGLPAGCLHRALLVTQGAQAVAGELPDLSATVLWGLGA
TLQAEAPQQAVTLVDLEAGLDALVGIETVLNAADAIDAGAARAPAWPDHLALRAGRWHQR
VLAPATARGPLTISGDGSYLVTGGLGGLGRRVVEFLHARGAGRIVVLGRTLPAEPPAWLA
ALQAERAVVELVACDLSDAARVASVPGTLGRELPLRGIVHAAGVLDDARLIDQDAARLRR
VAAPKLDGARHLLDALAGASLAASLDFVWLFSSITALHGGAGQANYAAANAALDGYAHTL
RARGVPATAINWGPWRDTGMLARVARPEATYARLHADPLEPAEAARWFDALLATDGAQLC
VVHWRLDALARVPGLPALLRDLVTAATSVATPATAGQAGPASYRQRLADALPAERAALAR
RLVAEQIALVTGIAAATIEPAAPLSILGMDSLMSVALSDALAHCLGIAASATLLFDHPTL
DALALHVLAANAPAGSAVAEAASVAPAVEATEPAAAPLDTELSEIEGLQDDDLAALLGKE
FIRE
NT seq
7935 nt
NT seq
+upstream
nt +downstream
nt
gtgccgttgctgtcggcctgccgcgagctcggaattctcgccgcgctgcaagcgggcccg
gtcggcctgacgcggctcggcgcggacctgcgcgcgaaccccggctatctgcgcctggca
tttcgcgcgctgcacgcgctcgactgcgtggcctcggacgatcacgagacctatggggcg
accgcgcgctttcgtgcctgcgccgctctgcccgaaggcatcgacacgctgtaccggatc
gacttcgacgcctgcctgggcgaaggcacgcaggcgacgcggctggaaccctggttcgcg
ctgtcggcgcgcggctgggatagcgaggataccgaatgggcgcaactgctcgacggcgca
ttgacggttccgctgctgcttgcgctggccaggcgcggagtggggcgcggcaacggagat
gacgacgcgcgactggacacgcgtgtgcatccggcgctgcacgcgatgctgcgcgactgg
ctcgcggcgcgccaatggctcgcgccggcggacgggctcaggctcaacgagcgcggccgg
cacctgtgcgagcgcgcgttgacgatgggcgtgaccgcctcgtaccggccgatgctgatg
gcgctgcccgagctgatcggcggcgatccgcgccgggtgctgacgcgcgacgccgacggc
cacgagacctatgtggaccgcaccctcaacgtgatcggcagcggcttccagcacggcaag
tatttcaacgacatggccgacctggtggtcgagctgttcgaccgcgagccgctcgacgcg
cagccgcgctacatcgtcgacatgggttgcggcgacggcgccctgctgcgccatctgtac
aaggcgatcgcgacgcgctcggcgcgcggccgctgcctcgatgggtacccgctgctgttg
atcggcgccgactacaaccagcgctcgctcgacgccgccggccgcacgctcgagggcctg
ccgcaccttctggtgcatgccgacatcggcaagccgcaggcgctgctcgacgcgctgcgc
gagcacggcatcgacgatcccgacgcgatcctgcacgtgcgctcgttcctcgaccacgac
cggccgctggacctgacggccgagccggccgatgcggcgcagcctgccgccgacgatcac
gtctacgtggacgcgcgcggcaactggctgtcctcggcgcgcgtcgcgcgcgacctgcgc
gagcatctttcgcgctgggccggcatcataggccgccatggcctgatcgtgctcgaggtg
ttcgcgctgccggtgcggctcacgcgcgagtatttcagccagaccgaaagcttcagcttc
gatttctatcacgcgctgtcgcgccaggcgctggtcgacgccggcaccttccaccaggcg
ctggccagcgccgggctctatccggatcgcgaatcgctgcgccgctacccgagcgtcacg
ccgttctcgcggatcgtgctgcagcgcgtgcatcccaagccgttcacgatccgtaccttg
cagtcggacgacatcccggccctgctcgagatcgacgcgcgctgctggcccgagccgctg
cggttgtcgcgcgaggcgatcgagcagcgccatcgccgtttccccgaggggcagttcgtc
gtcgaataccaagggcgcgtggtcggcgttctctacacgcagcgcatcgacgatctcgat
gccgtgctggggcgccgtcatgccgactacgccgaagcgcacgtcgccaacggccgctac
tggcaactgatctcgatcagcgcgcatcccgatttcccgtcgctggcgctcggcgaccag
ctgctcgaacacgcgctcgacctggccgcgctgacggccggcgtcgaaacggtctacggc
atcacgcgttgtctctcttttatttcgcaatccgaaacgatggaggcctatatcggcctg
cgcgacgcgcacggtcaccccgtcgatccgctgctgcgcttccatcacctgcatggcgcc
agcatcgagcgcgtggtaccgggcgcgcgccccgaggacctcgacaacggcggcgacggc
gtgctgatccgctacgagctttcggcgcgcttccgcgcggcgggtgcggcggccctgccg
gcggccggcgatgagtgtcgcgagcgcgacacgctcgaagtcgtgtccgaatcggtccgg
cgcatcatgcgcgtgcccgacagcttcgcggccgattgcccgctgcgcgagctgggcctc
gattcgatggggctgatggagctgcgcctgctgctcggcgccgcgttctcgatcgagttc
gatccggccgcgttcttcagctatccgaccgcgcgcgcgatcgccggccatatcgacgcg
cagcgccggccggccgatgccgccgcctcggcctcggtgggccgtgcctcgttcccggcc
cggccggacgcgtcgcggcgggcggatgcctcggccgattcgacgaacccgggcgctgcc
gccggcacgcgcgagaccgaggtggcgatcgtcggcatcgcgctgcgtttcccgggcggc
atcgacacgccgcaagcctactggcgcatgctcgacgagggccgctgcgtgatcggcgag
cgccccgacacgcgctggcgcgaatatcgcgaggagctggccgcgctggcgccggccttg
ccgcagatccatcgcggcggtttcctggccgaggtcgaccgcttcgacgccgcgttcttc
cgcatcacgccgcgcgaggcgcaggcgctcgatccgcagcagcggctgctgctcgaactg
gtccacgaggccttcgagcaggccggcatcgacgccgacacgcaggccgggcgcgaggtg
ggcgtgttcctcggcgcctatacgcacgactacgaggcgctgacgctgcgcgagcgcgcg
ctcggcgagatcgacgcctggttcggctcgggcaccgcgctgtccacggcggccgggcgg
cttgcctattgcttcgatttccgcggccccacgatgacgatcgacaccgcctgctcatcc
tccagcagcgcgatcttctcggcttgccgcagcctgctcgatggcagcgcctcgctggcg
gtggctgcctcggtgaacctgatgatcgggccgtcgctgagcgtggcctacggccgcgcg
agcatgctctcgcccgacggcctctgcaagaccttcgatgccggcgcggacggctacgtg
cgcggcgagggtggcgtggtgctgctgctcaagcgcctcgacgacgcgctggccgacggc
gaccgcgtccacgccgtgatcaagtcggccgcgctgatgcaggacggccgcaccaacggc
ctgaccgcgccgaacgggcaggcccaggtggacgtgatccgccgcgcgctggcccaggcc
ggctgcgacccggccgacatcgactatgtcgaggcgcacggcaccggcacgcggctcggc
gatccggtcgagatccaggcgctgcacgaggcctattgcgccggcgtcgagcgtgccgcg
ccgctgtcggtcggctcggtcaagaccaatctcggtcataccgaggcggtctcggggatg
gccggactggtcaaggtggtgctctcgatgcagcaccgcagggtgcccgcgcatctgcac
ctgaaccagcccagcccgctgctccggctcgacgaacgcaacatcgagatcgcgcggcag
gctcgcgactggcaggccacgccgggccgcccgcgccgcgccggcatcagctcgttcggc
ttcagcggcagcaacacccacctgatcgtcgaggaattcgtggcgcccgaagccatgccc
gcggcgcctgtcgcggcgccgctgcctgcggtggtttcggccgcgacgccggccgcgctg
cgcgccaatctcgcggcgctggccgagtatctcgaagcgagcccggcgccgctcgacctg
gcggcgctctctcgcgcgctgacggccgggcgcgcccagcacgcgcgtcgcgtggccttc
agcttcgattcgaaggaggcgctgcgcgagcgtctcgcgcaggcccaggccgccgtcgat
cacgacgcggcaccgcgcgccggcctgcgcatcgccttcatgtacaccgggcagggtgct
cagtatcacggcatggcgcagcggctggccggcaccagcccggtgtttcgtgcgcacctg
gagcgctgcgcggcgctggtgcgtgagcatgccggtttcgacctgttcgacctgatgtgg
ggcgagccgcgcgcgcgcatcgacgagacgcgctacacgcaggtcgcgctgttctgcgtc
gagcacagcctcgcgctgctgctgcgcgaggccggcatcgaggcgagcgtggtgctgggc
cacagcgtcggcgaatacggcgcggcctgctacgccggcgtgatggaagaagccgccacg
atccgcctgctgagccgtcgcggcgagctgatgcacgagggcaccgcgcgcggcgcgatg
gtcgcgctgctcgcgccgctcgccgaggtcgaggcgctgctgcgcggcttcgaccggctg
gccgtggccgcgctcaacggcccgcgcaaccaggtggtggccggcgattcgcagcagctc
gaggcgctggtgcggctggccggcgaacggcagatcccggccttcccgctgccggtcgag
cgcgccttccactcgccgctgatggcgccgatcctgccgggcttccgcgagctggccgag
cgcttcgcctatgccgcgccgcgcgcgacgctgatctcgaacctgacgggcgaggtctgc
cgcggcgcgcccgacgccggctactggaccgatcacattcgccagccggtgcgcttcgag
cactcggtgcgcacgctgctcgcgcaggaggtcgacctggtgatcgagatcggcccgaag
ccggtcctcacccgcatggcgcaggccgtcgcgcccgcgccgacactgcagtggctgccg
gcgctggtcgatgccgagcgccatggcctcgccgcgatcttcgcgaaggccagcgaggcg
gggctggcggtgaactggcgcgtctatccgcacgagagtaccgcgcggctcgacgatttg
ccgctgtatcgcttccagcgcgagtcgtactggctgccggctctcggcgcgcgcggcgcg
gcaccgggcgcggcgcgcgaagccggcgctgccttgccggattcgccgtcgcaggccggc
tcgcgcgtcgagccgaatgtcgatgcggccgcgcgtaccgaggtgcgcatcgatccggcg
ctggaccgcgcgccgtgggcgcacgtgatcggccggcacagcgtgttccccgctggcggc
tacctcggcttggcgatcgaggccgcgctgcgctggctcgaccgcccggccggcgtggtg
ctgcgcgggctgcgtgtcgagcagatgctgcggctggccgaggacggcgcctaccggctc
gaagcgacggcccggccgggcgatccgggcgagggcggcgatcccgcccgcgcggcgatc
ctggtgcgcagcgcgggcggcaccggcgcggcctggaccacgcatgcgcgcgccacggcc
gagccgctggcggccggcaccgccgcgtccgtgctcgcggcgcccgccgatacgcaggcg
gtcgcgatggacggcgcctcgttctaccggcgcgtggccgcgctcggctacgactatgcc
gcgccgttccgcggcattacctggctgcgccgcgccggcgacagcatcggcgccgaccta
tcggccgccggcacgcccgagccggacggctacgcggccgcgccctggcgcctcgaccat
tgcctgcagaccgtgctggccgcgaggctcgaggcgctggaagccgatggcgcgcaccta
ctgctgccgaccggcgtcgagcgcctggtctggcacggcccgctgccggccgcgccgcgc
gtggtctgccgcgtgcgcgcgcatcacgatggcgtcgaggccgaactgcgtatcaccgac
gcccagggcaagccgtgttgcgagatggagggcctgcgctttgcgcgcgtcgatcgtcgc
gggctggccggcgcgggcggcgctgcctcggtggtgtcgcccgcgtccgcaccgtcgcga
tccgcctcgccgctgcacgcgctgcgctggcggcgcgtcgacccgccttccgtcgccgcc
gacgaggccggccggtcctggctggtcgttagcgccgccggcgcgtcgggcggtgccttc
gccgccgcgctcggcgcgcgcggtgcccgcgtcgagcggctcgatccgcgcgacgcgcat
gacgcggccggcctggccgccttcgcgcgcagcctggccgactacgccgcggcgcgggcc
gagccgttcggcctgatccatctgcacgcggacgccgccgtcgatctcgccgtggtccgt
ttcctcgccggcctgcccgccggctgcctgcatcgcgcgctgctggtcacgcagggcgcg
caggccgtggcgggcgagttgcccgatctgtcggcgaccgtgctctgggggctcggcgcc
acgctgcaggccgaggcgccgcagcaggcggtcacgctggtcgatctggaggcgggcctc
gacgcgctggtcgggatcgagaccgtgctcaacgccgccgatgccatcgacgccggcgcc
gcgcgcgcccccgcgtggcccgatcatctcgcgctgcgcgcgggccgctggcaccagcgc
gtgctcgcgccggccaccgcgcgcggtccgctgacgatttccggcgacggcagctacctg
gtgacgggcggcctgggcggcctcggccgtcgcgtcgtcgaattcctgcatgcacgcggc
gcgggccgcatcgtcgtgctcgggcgcacgctgccggccgagccgccggcctggctcgcg
gcgttgcaggcggaacgtgccgttgtcgaactggtggcctgcgatctaagcgatgccgcg
cgggtcgcgagcgtgccgggcacgctggggcgcgagctgccgctgcgcggcatcgtgcat
gcggccggggtgctcgacgatgcgcgcctgatcgaccaggatgcggcgcgcctgcggcgc
gtggcggcgcccaagctcgacggcgcgcgccatctgctggacgcgctggctggcgcatcg
ctggccgcgtcgctcgatttcgtctggctgttctcgtcgatcaccgcgctgcacggcggc
gcgggccaggccaactacgcggccgccaatgccgcgctcgacggctacgcccacacgctg
cgcgcacgcggcgtgccggccaccgcgatcaactgggggccgtggcgcgataccgggatg
ctggcgcgcgtggcgcggcccgaggccacctatgcgcggctgcatgccgatccgctcgag
cccgccgaggcggcgcgctggttcgatgcgctgctcgccaccgacggcgcgcagctctgc
gtggtgcactggcgcctcgatgcgctggcgcgcgtgccgggcctgcccgcgctgctgcgc
gacctggtgacggccgcgacatcggtggcgacaccggccacggccgggcaggccggtccc
gcgtcctaccggcagcggctcgccgatgcgctgccagccgaacgcgccgcgctggcgcgg
cgcctggtggccgagcagatcgcgctggtcaccggcatcgccgccgcgacgatcgagccg
gccgcgccgctcagcatactcggcatggattcgctgatgagcgtcgcgctcagcgacgcg
ctggcccactgccttggcatcgccgcctcggccacgctgctgttcgaccacccgacgctc
gacgcgctggccctgcacgtgctggcggccaatgcgcccgccgggtccgccgtggcggag
gccgcgtccgttgcgccggcggtcgaagccacggaacccgccgcggccccgctcgatacc
gagctcagcgaaatcgagggattgcaggacgacgatctggccgcgctgctcggcaaggag
ttcatccgtgaataa
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