Burkholderia ambifaria AMMD: Bamb_5944
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Entry
Bamb_5944 CDS
T00398
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
bam
Burkholderia ambifaria AMMD
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
CBS
PAS
PAS_8
PAS_4
PAS_3
Motif
Other DBs
NCBI-ProteinID:
ABI91489
UniProt:
Q0B2Y4
LinkDB
All DBs
Position
3:complement(477601..479838)
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AA seq
745 aa
AA seq
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MRAGDTRVGELKARQTGDDESMIFPTDTASHCPAEAEFFLHLKPIESIRVQPPVVVPEQT
ALHEVIARMRVQRLDAILVGYDDGEHGILTERDIVRLLADGGAHGAVGAYASKPLQMLTA
RQSLYAAQRFMTEQSVRHVGIEDEDGRLTGLLCFADVLQSIEHEYANQLRSALRERDEAL
GLARFNLRMADRVFESALEGIMVTDRHAKIERVNQAFTRLTGYTEDEVVGRNPGLLSSGR
QTPDFYKQLWHSLTTDGHWQGEIWNRRKAGELFLEYLTITSIRDSESEISHYAAIFSDIT
QRRQAEERLGYLATHDVLTNLANRMLFEERLTHAIVHAKRFGRKVAVMYLDLDRFKLVND
TLGHNAGDEVLKMVAERIVANVRANDTVARMGGDEFALVLEEVDDVRDVGRVARKLLDEV
GRAIDIGDRQIFVTPSIGISIYPDDGTEAEDLILLADQAMYGAKSRGRNVFQFFESKMTS
SAIEQLETLGELHRALEQNEFRLFYQPQYDLASGRIVGVEALLRWLHPSRGLVPPRDFIG
LAERSALTVPIGRWVLHEACRQARRWLDEGFEFGRVSVNVSARQCFTDHFLSDLTTILSE
TALPAEYLQLELLESMAMNTREEIGILLRELATRGISLAIDDFGTGYSSLVYLKDLPVDT
LKIDQSFLTDCGSGSTDDAIVRAIVAMGRALGLDVVMEGVETAKQLAFLQEIGCHQGQGF
LFARPQPADQLVGISSRRGAELLAE
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgggcgatacacgcgttggcgaactgaaggctcggcagactggcgatgacgaa
tcgatgatttttcctaccgataccgcgagccactgtccggccgaggcggaatttttcctg
cacctgaagccgatcgaatcgatccgcgttcagccgcctgttgtggtgcccgagcagacc
gcgctgcacgaagtcatcgcacggatgcgtgtgcaacggctcgatgcgatcctcgtcggc
tacgacgatggcgagcacggcatcctgaccgagcgggacatcgtccggctattggcagac
ggaggggcccacggcgcggtcggggcctacgcgagcaagccgctgcagatgctgaccgca
agacagagcctgtatgcggcgcagcgtttcatgaccgagcaaagtgtgcggcatgttggc
atcgaggacgaggatggccggctgaccgggttgctctgtttcgcggacgtgctgcagagc
atcgagcacgaatacgcgaaccagctgcgcagcgcgttgcgcgagcgcgacgaagcgctg
ggtctcgcgcgctttaacctgcgcatggcggatcgggtgttcgaatcggcgctcgaaggc
atcatggtgaccgaccggcacgcgaagatcgagcgtgtcaaccaggccttcacgcgcctg
accgggtacaccgaggacgaagtggtcgggcgcaacccgggcctgctgagttccgggcgc
cagacgcccgatttctacaagcagctgtggcattcgctcacaaccgatggccactggcaa
ggcgaaatctggaatcgccgcaaggccggcgagctgtttctcgaatacctgacgatcacc
agcattcgcgacagcgaaagcgagatctcccactacgcggcgattttttccgacatcacg
cagcggcgccaggcggaggagcggctgggctatctcgccacgcacgacgtgctcaccaat
ctcgcgaaccggatgctgttcgaggagcggctcacgcacgcgatcgttcatgcgaagcgg
ttcgggcgcaaggtcgcggtgatgtacctcgatctcgaccgcttcaagctggtcaacgat
acgctcggccacaacgcaggcgacgaggtgctgaagatggtcgcggagcgcatcgtcgcg
aatgtgcgcgcgaacgacacggtggcgcgcatgggcggtgacgaattcgcgctcgtgctc
gaggaggtcgacgatgtccgcgacgtcgggcgagtcgcgcgcaagctgctggacgaagtg
ggacgggcgatcgatatcggcgatcgccagatcttcgtgacgccgagcatcggcatcagc
atctatccggacgacggcaccgaggcggaggacttgatcctgctcgcggaccaggcgatg
tacggtgcgaagagccgcggcaggaacgtgttccagttcttcgagagcaagatgacgtcg
tcggcgatcgagcagctggagacgctcggcgagttgcaccgcgcgctcgagcagaatgaa
ttccgcctgttctaccagccgcaatacgatctggccagcggccggatcgtcggcgtggag
gcgctgctgcgctggttgcatccgagcaggggtttggtgccgccgcgcgacttcatcggg
ctcgcggagcgatcggcgctgaccgtcccgatcggcaggtgggtgctgcacgaagcctgc
cgccaggcgcgccgctggctcgacgagggcttcgagttcgggcgtgtgtcggtgaacgtg
tcggcgcggcagtgctttaccgaccactttctgagcgacctgacgaccattctcagtgaa
accgcgttgccggccgaatacctgcagctcgagttgctcgaaagcatggcgatgaacacc
cgcgaggaaatcggcatcctgctgcgcgaactggcgacgcgggggatcagcctcgcgatc
gacgatttcggtacgggttattcatcgctggtgtatctgaaggatctgcccgtcgatacg
ctgaagatcgatcagtcgttcctcacggactgcggctcgggcagtacggacgacgcgatc
gtgcgcgcgatcgttgcaatggggcgcgcgctggggctcgatgtcgtgatggagggcgtc
gagacggcaaagcagctggccttcctgcaggagatcggttgccaccagggccagggcttc
ctgttcgcacggccgcagcctgccgaccagctggtcggcatctcgtcgcgccgcggcgct
gaattgctggcagagtga
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