Burkholderia ambifaria AMMD: Bamb_6201
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Entry
Bamb_6201 CDS
T00398
Name
(GenBank) YadA C-terminal domain protein
KO
K21449
trimeric autotransporter adhesin
Organism
bam
Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bam02000
]
Bamb_6201
Transporters [BR:
bam02000
]
Other transporters
Pores ion channels [TC:
1
]
Bamb_6201
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
YadA_anchor
ESPR
FAM81B
DUF285
Motif
Other DBs
NCBI-ProteinID:
ABI91745
UniProt:
Q0B278
LinkDB
All DBs
Position
3:770635..774696
Genome browser
AA seq
1353 aa
AA seq
DB search
MNKSFKSIWNEALGAWVAASELDRARGKRVASSRSAGEHAAHEGAAASMATPPGLSPRRL
VMMMAAAYLGLFQTGAHAQYSAGGGSATGGASSIAVGNGSLATQTNSTAFGNLSTAAGVS
STAIGPGAHAMADGGTAVGINSQATGVNSVAMGVQAIGSGAFAVAVGNLSTATQTGSVAL
GSGAAATGVSAIGLGNNAFASGQYAAALGLGASAAGAQSIALGYASHADLTGSVALGNQS
TGSGAAAVAVGSGALASGNSGVAMGVNSGAKGTSSIAIGWGGTAGVPGSGTQSLGTSSIA
LGSNTTAGANNAAAFGLNANASGLSSIAMGVQSTATQQYGVALGNLALATGISASALGPG
ATASALNSTAVGINSVAAATSTVAIGDSNSVAAGAGAGSIAGGNLSKVLGGTGAVALGFG
QTVSGNGAVAIGDPSTAIGTGAVTAGSNNTANGDGAVAIGNSNIAQGIGSVALGNTSTAA
AAGAVAFGASAVANNANDVALGSGSVTAAPHPTATGTIGGVTYTFNGVNPVSVVSVGGVG
TERQITNVAAGRISPTSTDAINGSQLDATNQAVTSLSTSTLSSITSLSTSTSTGIGSLST
GLSSTNSSVTSLSTGLSSTNSAVTSLSTSTSTGISSLSTGLSSTNSAVTSLSTSTSTGIG
SLSTGLSSTNSAITSLSTSTSTGLSSLSTGLSSTNSTVTSLSTSTSTGLSSLSTGLSSTN
STVTSLSTSTSTGIGSLSTGLSATNSNLTSLSTATSTGIGSLSTSLSSIVNNNTNLGNST
AGAIGGGSTYNPTTGTISAPSYVTYNSDGSTSINNNVGSVVDNINAHGIKYFHANSTAPD
SQALGVDSVAIGPNAISRVDGSIALGAGSVADRATTPSSGIIRNGTAAIPFNTTDQTLLG
AVSVGDTTNRTYRQITNVADGTGQQDAVTVRQLTGALQSFAVTGQKYFHANSTAGDSLAV
GAESVAVGPTTVVNGDNGVGIGNGAIVDQTAPGGVAIGQAASSAQADAIALGSGASALGA
QSVAQGANASAVSVGSVALGSGAHSTATDALALGAGASATLANSVALGAGSLTTVGALTN
YVAYGLSSPQSSAGEINIGNRQITGLAAGKNGTDAVNVSQLDSVANQLTTLIDQRTTNLG
GQYTTNPPGGNVPPGASGSNSSAGGSGAVASGSNSTAVGNSSTASGNGSTAIGVGSIASG
NNSTAVGAGSNDGGRSNVVAVGSADSPRQVVNVAAGTQGTDAVNVNQLNAVSNQFTQSLN
TVNNQISQMQQQIQQTDSMAREGIAATAALASIPHMDRDSNFAMGVGTASFQGQKAMAVG
VQARLTENLKATLNGGFAGSQRVVGAGVLYQWK
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtcgttcaagtcgatctggaacgaagcactgggggcgtgggttgcggcgtcc
gagctcgatcgcgcgcgcggcaagcgcgtggcgtcgtcgaggagcgcgggcgagcacgct
gcccacgaaggcgccgccgcgagcatggcaacgccgcctgggctgtcgccccggcgactg
gtcatgatgatggccgccgcgtacctcggactgtttcagacgggcgcccacgcgcagtat
tcggccggtggcggctccgcgacgggcggtgccagttcgatcgcggtcggcaacggttcg
cttgcgacgcagacgaattcgaccgcgttcggcaatctgtcgacggcggcgggggtgtcg
tctacggcgatcggcccgggtgcgcatgcgatggcggatggcgggacggccgtcggtatc
aactcgcaggcgaccggcgtcaacagtgtggcgatgggcgtgcaggcgatcggttcaggc
gctttcgcggtcgcggtcggcaacctgtcgaccgcgacgcaaaccggttcggtggcgctc
ggtagcggtgcggcggcgaccggcgtgtccgcgatcgggctcggcaacaatgcgttcgcg
tcgggccagtacgcggcggcactcgggctcggggcgagcgcggcaggggcgcaaagcatc
gcgctcggctatgcgtcgcatgccgacctgacgggctcggtcgccctcggcaaccagtcg
acgggttcgggggcggccgccgttgccgtgggcagcggcgcgctggcttcaggcaattcg
ggcgtggcaatgggggtgaacagtggcgcgaagggcacgtcgtcgatcgccatcggctgg
ggcggcaccgcaggcgtacccggctcgggcacgcagtcgctcggcaccagttcgatcgcg
ctgggatcgaatacgacggccggcgccaacaacgcggccgcattcggcctgaacgcgaat
gcatcgggcctcagttcgatcgcgatgggcgtgcagtcgaccgcgacgcagcagtatggc
gttgcgctcggcaacctcgcgctcgcgaccggtatctcggcaagtgcgctggggccgggc
gcgacggcgtcggcattgaattcgacggcggtcggcatcaacagcgtggcggcggcgacc
tcgaccgtcgcgatcggcgacagcaactcggtcgccgcgggcgcaggcgccggctcgatc
gccggcggcaacttgtcgaaggtcctgggcggcaccggcgccgtcgcgctcggctttggc
cagaccgtcagcggcaacggcgcggtcgcgatcggcgacccgagcaccgcgatcggcacc
ggcgcggtcacggccggttcgaacaacaccgcgaacggcgacggcgccgtggcgatcggc
aactcgaacattgcgcaaggcatcggctccgtcgcgctcggcaatacgtcgacggcggca
gcggcgggcgccgtggcgttcggcgcgtcggccgtcgcgaacaatgcaaacgacgtcgcg
ctcggctccggttcggtgaccgccgcgccgcatccgaccgccacgggcaccatcggcggc
gtcacgtatacgttcaacggcgtcaatccggtgagcgtcgtcagcgtcggcggagtggga
accgagcgccagatcaccaacgtcgcggccgggcggatcagcccgacgagtaccgatgcg
atcaacggctcgcagctcgatgcgacgaaccaggcggtgacttcgctgtcgacgtcgacg
ttgtcgagcatcacgtcgttgtcgacttcgacgtcgaccgggatcggttcgttgtccacg
ggcctgagctcgaccaacagttcggtgacgtcgctgtccacgggcctgagctcgaccaac
agcgcggtgacgtcgctgtcgacttcgacgtccacgggcatcagctcgttgtcgaccggc
ttgagttcgacgaacagcgcggtgacgtcgctgtccacttcgacgtcgaccggcatcggt
tcgctgtccaccggcttgagctcgaccaacagcgcgatcacgtcgttgtcgacgtcgacc
tcgacgggcctcagctcgttgtccaccggcctgagttcgaccaacagcacggtcacgtcg
ctgtccacgtcgacctcaacgggcctcagctcgttgtccaccggcctgagttcgaccaac
agcacggtcacgtcgctgtccacgtcgacctcaacgggcatcggctcgctgtccactggc
ctgagcgcgacgaacagcaacctcacgtcgctgtcgaccgccacgtcgacgggcatcggt
tcgctgtcgacgagcctcagctcgatcgtgaacaacaacaccaatctcggcaacagcacg
gcaggcgcgatcggcggcggctcgacctacaacccgacgaccggcacgatttcggcgccg
tcgtatgtgacgtacaacagcgacggctcgacctcgatcaacaacaacgtcggctccgtg
gtcgacaacatcaacgcgcacggcatcaagtatttccatgcgaactcgaccgcgccggac
agccaggcgctgggcgtcgacagcgtggcgatcgggccgaacgcgatctcgcgcgtggac
ggcagcatcgcgctcggtgcgggctcggtggccgatcgcgcgacgacgccgtcgtcgggc
atcatccgcaacggcaccgcggcgatcccgttcaacacgacggaccagacgttgctcggc
gcggtgtcggtgggcgacacgacgaaccgcacgtatcgccagatcaccaacgtcgcggac
ggcacggggcagcaggacgcggtgacggtacggcagctgaccggcgcgttgcagtcgttc
gcggtcacgggccagaagtacttccacgcgaattcgacggccggcgactccctcgcggtc
ggcgcggaatcggtcgcggtcgggccgacgacggtcgtgaacggcgacaacggcgtgggc
atcggcaacggcgcgatcgtcgaccagaccgcacccggcggcgtcgcgatcgggcaggcc
gcgagttccgcgcaggccgatgcgatcgcgctcggcagcggcgcgtcggccctcggcgcg
cagtcggtcgcacagggtgccaatgcgtcggcggtcagcgtgggcagcgtcgcgctcggc
tcgggtgcgcacagcaccgcgaccgatgcgctcgcgctcggcgccggtgcgtcggcgacg
ctcgcgaacagcgtcgcgctgggcgccggttcgctgaccacggtcggcgcgctgacgaac
tacgtcgcgtacggcctgagcagcccgcagtcgtcggccggtgaaatcaatatcggcaac
cggcagatcacgggcctcgccgcgggcaagaacggcacggacgcggtgaacgtatcgcag
ctcgactcggtcgcgaaccagttgacgacgctgatcgatcaacgtacgaccaatctcggc
gggcagtacacgacgaacccgccgggcggcaacgtgccgccgggggcgagcggttcgaat
tcgtcggcgggcggctcgggggcggtcgcgtcgggttcgaacagcacggcggtcggcaac
agttcgacggcgtccggcaacggctcgaccgcgatcggcgtcggctcgatcgcatcgggc
aacaactcgacggcggtcggcgcgggcagcaacgacggcggccgctcgaacgtcgtcgcg
gtcggctcggcggattcgccgcgccaggtcgtcaacgtcgcggcgggtacgcagggcacc
gatgcggtgaacgtgaaccagttgaatgcggtgtcgaaccagttcacgcagtcgctgaac
acggtcaacaaccagatctcgcagatgcagcagcagatccagcagaccgattcgatggcg
cgtgaggggatcgccgcgacggccgcgttggcgtcgattccgcacatggaccgcgactcg
aacttcgcgatgggcgtcggtacggcgtcgttccagggtcagaaggccatggccgtcggt
gtgcaggcgcgcctcacggagaacctgaaggcgacgctgaacggcggcttcgccggcagc
cagcgcgtcgtcggcgcgggcgtgctgtatcagtggaagtaa
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