Burkholderia ambifaria AMMD: Bamb_6369
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Entry
Bamb_6369 CDS
T00398
Name
(GenBank) YadA C-terminal domain protein
KO
K21449
trimeric autotransporter adhesin
Organism
bam
Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bam02000
]
Bamb_6369
Transporters [BR:
bam02000
]
Other transporters
Pores ion channels [TC:
1
]
Bamb_6369
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
Baculo_PEP_C
Motif
Other DBs
NCBI-ProteinID:
ABI91913
UniProt:
Q0B1R0
LinkDB
All DBs
Position
3:984107..987721
Genome browser
AA seq
1204 aa
AA seq
DB search
MQRNQISALVAAMFASAGVLVAGAAHADNFVDRGNPDNALNGQCIDGTNPLCVATKSGTF
VATSSTNFTSGTNAKAGSSGIAIGDQSNAGSQGGSGSGGGIAIGVGAQALANSATAIGTV
AVAQGNTALAVGRQSAAIGDYSMALGNVADAHGTSSIALGHSALASGDRSIAIGGANPTT
SDGVSNGASYDAATQTRAGGTQSVAIGAGAQTNDNNQVAIGSGSVGANNGGTPVFGGTAA
PVGGAVSFGSLGHERQIKNVAAGAADTDAVNVEQLKNVNSTLSTGIANVDARVTSVGNTL
STSIANVDQRVSNVGNSLSTSIVTATQNVVKYTDDSHAAIALDGSNGTTINGVAAGVADT
DAVNVGQLKGSVAPLQTSLSTAAANITNLQNNVTGLNASLSTAASNIGGLQAADARNVKY
DGASGFDSVTFAGPNGTTLHNVADGKDAHDAVNAGQLGSGLASLSTSVTSSVSTTIGNLS
TSITSQIGNATKNAVQYDDDAHGGVTLGGQGAPAPVALHNVADGVSANDAVNVGQLGKAT
DTLNQSIANVGNSVTKLGDQVTTNTGNIAALQQDALQWNPSLGTYDASHGGNSPQRIGNL
AAGQNGTDAVNVDQLNAAIHDGTSQLDALAVKYDDASKHQVSLGAGNGGIPVRVTNVAEG
NVSAGSTDAVNGAQLRRAIDGTAAALGGGATANTDGSITAPAYKIGGDSFNNVGDALTNL
DGRVGSNTTTLANHETRIGNAETNIAVNTTAIAGLQKDALQFDPTLGAYNAARGGAPTKL
TSVADGNVAAGSTDAVNGGQLYGVKSDLEQQITQVSNQTGEAVKNVVKYDVDGNGNRLNS
VSLIGGNPNAAVVLKNVAAGTDDTDAVNVKQLKSVQSNLDQLGALAVQYDDSSKGSITLG
GAGGTRITNVKAGTLSATSTDAVNGSQLYATNQQVSKNTTDIANLQDNVTNIANGKAGLV
QQQDPKGAITVGKDSGGTSVNFSGTAGDRVLTGVAAGVNANDAVNMAQFNDALKTAAVND
QIRAAATDANTTWIARADAGSIGSTATATGKNAVAVGQGSVADRDNSFSVGAKGNERQVT
NVAAGTAPTDAVNVQQLNDNLNAASTQAKGYTDQRIGQVYNSFNDLKKDMYGGVASAMAV
AGLPQPTGAGRSMVSAATSNYHGQQGFAAGYSYVTENNRWVVKASVTGNARSDFGAVVGA
GYQF
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggaaccagatttcggcgctcgtcgccgccatgttcgcaagcgcaggcgtgctg
gtcgcgggggccgcacacgcggacaacttcgtcgatcgcggcaacccggacaacgcactg
aacgggcagtgcatcgacggtacgaacccgttgtgtgtcgcgacgaagagtgggacgttc
gtcgcgacgagcagcacgaacttcacgtctggtacgaatgcgaaggccggctccagcggc
attgcgatcggcgaccagtcgaacgcaggcagccagggcggctccggcagtggcggcggc
attgcgatcggcgtcggcgcgcaggcactggcgaactcggccacggcgatcggcacggtg
gccgtcgcgcagggcaatacggcgctcgcggtgggccgtcagtccgccgcgatcggcgat
tactcgatggcgctcggcaacgtcgccgatgcgcacggcacgagttcgatcgcactcggt
cactcggcgctggcgagcggcgatcgctcgatcgcgatcggcggcgcgaatccgaccacg
agcgacggcgtgtcgaacggcgcatcctacgatgccgcaacgcaaacccgtgcgggcggc
acgcaatccgtcgcgatcggcgccggcgcgcagacgaacgacaacaaccaggtcgcgatc
ggctcgggcagcgtcggtgcgaacaacggcggcacgccggtattcggcggcacggccgcg
ccggtcggcggcgccgtctcgttcggttcgctcggccacgaacgccagatcaagaatgtc
gcggcgggcgcggccgacacggacgccgtgaacgtcgagcagctgaagaacgtgaacagc
acgctcagcaccggcatcgcaaacgtcgacgcccgcgtgacctccgtcggcaatacgctg
tcgacgtcgatcgcgaacgtcgaccagcgcgtgtccaacgtcggcaacagcctcagcacg
agcatcgtgacggcgacacagaacgtcgtcaaatacaccgacgattcgcacgccgcgatc
gcgctagacggcagcaacggcacgacgatcaacggtgtcgccgccggtgtcgccgatacg
gacgcggtcaacgtcggccagctgaagggcagcgttgcaccgttgcagacctcgctgtcg
acggccgccgcgaacatcacgaacctgcagaacaacgtgacgggcctcaacgcatcgctg
agcacggccgcatcgaacatcggcggcctgcaggcagccgatgcgcgcaacgtgaagtac
gacggcgcgagcggcttcgactcggtcacgttcgccggcccgaacggcacgacgctgcac
aatgtcgcggacggcaaggatgcgcacgatgccgtgaacgccggccaactgggtagcggc
ctcgcatcgctcagcacgagcgtgaccagcagcgtgagcacgacgatcggcaacctgagc
acgtcgatcacgagccagatcggcaacgcgacgaagaacgcggtgcagtacgacgacgat
gcgcatggcggcgtcacgctcggcggccagggcgcgccggcaccggtcgccctgcacaac
gtcgcggacggcgtgagcgcgaacgacgcggtgaacgtcggccagctcggcaaggcgacc
gatacgctgaaccagtcgatcgccaacgtcggcaacagcgtgacgaagctcggcgaccaa
gtgacgacgaacaccggcaacatcgccgcgctgcagcaggatgcgctccaatggaacccg
agcctcggcacttacgatgcgagccacggcggcaacagcccgcaacgcatcggcaacctc
gcggccggccagaatggcaccgacgcggtcaacgtcgaccagctgaacgcggcgattcac
gacggcacgagccagctcgacgcgctcgccgtgaagtacgacgatgcgagcaagcatcag
gtttcgctcggcgcgggcaacggcgggattcccgtgcgcgtgaccaacgtcgccgaaggc
aacgtgtcggccggcagcacggacgccgtgaacggcgcgcagctgcgccgcgcgatcgac
ggcacggcagccgcgctcggcggcggggcgacggcgaatacggatggctcgatcacggcg
cccgcgtacaagatcggcggcgattcgttcaacaatgtcggcgacgcgctgacgaacctc
gatggccgtgtcggcagcaacacgacgacgctcgcgaatcacgagacgcgcatcggcaac
gccgaaacgaacatcgccgtcaatacgaccgcgatcgccgggctgcagaaggacgcgctg
cagttcgacccgacgctcggcgcatacaacgccgcccgtggcggcgcgccgacgaagctg
accagcgtcgccgacggcaatgttgcggccggcagcacggacgcggtgaacggcgggcag
ttgtacggcgtgaagtccgatctcgagcagcagatcacgcaggtgtcgaaccagacgggc
gaggccgtgaagaacgtcgtcaagtacgacgtcgatggcaacggcaaccggctgaactcg
gtatcgctgatcggcggcaacccgaacgcggcggtcgtgttgaagaacgtcgcggccggc
accgacgatacggacgcggtgaacgtgaagcagctgaagtcggtgcagtcgaacctcgac
cagctcggcgcgctcgcggtgcagtacgacgacagctcgaagggctcgatcacgctcggc
ggggcgggtggcacgcgcatcaccaacgtgaaggccggcacgctcagcgcgaccagcacg
gacgcggtgaacggctcgcagctctacgcgacgaaccagcaggtgtcgaagaacacgacc
gatatcgcgaacctgcaggacaacgtgaccaacatcgcgaacggcaaggccgggctcgtg
cagcagcaggacccgaaaggcgcgatcacggtcggcaaggactcgggcggcaccagcgtg
aacttctccggcacggcgggcgaccgcgtgctgaccggtgtcgcggccggcgtgaacgcc
aacgacgcggtcaacatggcccagttcaacgacgcgctgaagacggcggcggtcaacgac
cagatccgtgcggccgcaaccgatgcgaacacgacgtggatcgcgcgtgccgatgccggt
tcgatcggctcgacggcgacggcaaccggcaagaacgcggtggcggtcggccagggctca
gtggcggatcgcgacaattcgttctcggtcggcgcgaagggcaacgaacggcaagtcacg
aacgtcgcggccggcacggcgccgaccgacgcggtgaacgtgcagcagctgaacgacaac
ctcaatgccgcgtcgacgcaggcgaagggctacaccgaccagcgcatcgggcaggtgtac
aactcgttcaacgacctgaagaaggacatgtacggcggcgtggcgtcggcgatggcggtg
gccggtttgccgcagccgacgggggccgggcgctcgatggtgtcggcggcgacgtcgaac
tatcacgggcagcaaggcttcgcggcaggctattcgtacgtgacggagaacaaccgctgg
gtcgtcaaggcgtcggtgacgggcaatgcgcgctccgacttcggcgcggtggtgggcgca
ggctatcagttctga
DBGET
integrated database retrieval system
