Bacillus velezensis UCMB5033: RBAU_1041
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Entry
RBAU_1041 CDS
T02795
Symbol
addB
Name
(GenBank) ATP-dependent deoxyribonuclease (subunit B)
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bama
Bacillus velezensis UCMB5033
Brite
KEGG Orthology (KO) [BR:
bama00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bama03400
]
RBAU_1041 (addB)
Enzymes [BR:
bama01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBAU_1041 (addB)
DNA repair and recombination proteins [BR:
bama03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RBAU_1041 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
HTH_MCM7
Motif
Other DBs
NCBI-ProteinID:
CDG29009
LinkDB
All DBs
Position
1084733..1088233
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AA seq
1166 aa
AA seq
DB search
MGVEFLVGRSGSGKTRLIIDSIQDELRREPFGKPIIFLVPDQMTFLMEYELAKTPDIGGM
IRAQVFSFSRLAWRVLQHTGGMNRPFVTTTGVQMLLRKLIEEYKHEFKVYQKASDKTGFT
EQVERMLTEFKRYCIEPEDVRRMAESGTASEYRGERMLSEKLHDLGILYQQMERSLAGHY
LHSEDYLTLLAQQIPLADVVKGARVYVDGFYQFTPQELRVLEQLIMHAEHVTFSLTADSP
SAEQAPDELDLFRMTGSTYYKLYQTAKELNADISCKELHGTKRHQYAPELACIESQYDVR
PAAAYTGGQEAFTVMQAQNRRAELEGIAREIQSLVRDGGYRYKDMAILIRQPEDYKDLLK
EVFADYGLPYFIDGKASMQHHPLIEFIRSSLDVVKGNWRYEAVFRCAKTELLFPLDQPEQ
KIREQVDQLENYCIAYGIKGERWTNGERFVYRRFVSLDEDFAQTDQEIEMEHMLNETREW
IAAPLVRLQNRMKKAKTVQSMAEALYLFLEDTDVPLKLDRKRQRAEEAGNMIEAQQHGQA
WDAVIQLLEEFTGMMGEDEISLALFQQMLETGTESLHFSLIPPALDQVFVGNMDLSRMYG
TSCTFVIGANDGVLPARPDENGVLSDDDREWLKAVGVELSSAGRERLLDEHFLIYMALSS
PSDRLYVSYPIADAEGKTLLPSIVVNRLGELFPDHQEKLSAADPEQVSEEEQLQYLVNKQ
VAQTYTASQLRLWTREYEISDVWWSAYNVLMKEPDHRRAKKLFSSLFFRNEAKRLERPVS
RQLYGEHIKGSVSRMEAFNACQFSHFASHGLQLKERQFFKLDAPDIGQLFHSSLKLISDR
LREQKLEWRDLTKDQCRNFSYEAVERLAPKLQKEILLSSNRHFYVKEKLQKIVTRVSGIL
SEHAKASGFVPVGLELGFGGSGPLPPLTFTLKNGCTMELVGRIDRVDKAESSKGLLLRIV
DYKSSDRGLDLAEVYYGLALQMLTYLDLSITHSEDWLGMKATPAGVLYFHIHDPMIQASL
PMGLDEIEQEIFKKFKMKGLLLGDREAISLMDTTLEEGRSNIVNAGLKKDGSLRSDSAAV
SERDFHLLTDHVRRTFEQAGEAITDGLVSITPYKLKDKTPCTYCAFQSVCQFDESLKENE
YRSLKAEKDGTILDWLKKEADDDANS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
ttgggtgttgagtttttagtaggcagatcggggagtgggaaaacgaggctgattatcgac
agcattcaagatgaactgcgccgggagccgttcgggaaaccgatcatttttctagtcccg
gatcaaatgacgtttttaatggaatatgagcttgctaaaacgccggatatcggcggcatg
atacgcgctcaagtgttcagtttttcgcgtttggcgtggcgcgtgcttcagcataccggg
ggcatgaaccgcccgtttgtgacgacgacgggtgtgcagatgcttttaaggaaactgatt
gaagaatataagcacgagtttaaagtgtatcaaaaagcgagtgacaaaaccggattcact
gagcaggtggaacggatgctgacagagtttaagcggtactgtattgagcctgaagacgtc
cgccgcatggcggaaagcggaacggcgtcagaatatcgcggagagcggatgctgtctgaa
aaacttcatgatttaggcattttatatcagcagatggaaagaagcctcgccggacactat
ttgcattcagaggattatttgacgctgctcgctcagcagattcctttggcggacgttgta
aaaggcgcccgtgtttacgtcgacggattctatcaatttacgccgcaggaattaagggtg
ctggagcagctgatcatgcatgctgaacatgtcacattctcgctgacggcggacagccct
tcggcggaacaggcaccggatgagctcgatctgttcagaatgacgggaagcacatactat
aagctttatcagacggcaaaggaattgaatgccgatatttcctgcaaggaactgcatggc
acgaagcggcatcagtatgcgccggagcttgcctgtatagagtcgcagtacgatgtgcgt
cccgccgcggcgtataccggcggacaggaagcttttaccgtcatgcaggcgcaaaacaga
agagctgagcttgaaggtattgcccgggaaattcaatcacttgtccgggatggaggatac
cggtacaaagatatggcgattctcatccgtcagccggaagattataaagatttgctgaag
gaagtgtttgccgattacgggcttccttattttattgacggaaaagcttctatgcagcat
cacccgcttattgaattcatccgttcaagcctggatgtcgtgaaggggaactggagatat
gaagcggtgttccgctgtgcgaaaaccgaactgttattcccgcttgatcagccggagcag
aaaataagagagcaggttgatcagcttgaaaattactgtatcgcctacggcattaaaggg
gagcgctggacgaacggcgagcggtttgtatacaggcgcttcgtatcgctcgatgaggat
ttcgcgcagacggatcaggaaatagagatggaacacatgctgaatgagacgagagagtgg
atagctgcaccccttgtccggcttcagaaccggatgaaaaaagcgaaaacggttcaaagc
atggcggaggctctttatctctttttggaagataccgatgttcccctgaagctggaccgg
aaaaggcagcgggccgaagaggccggaaacatgatcgaagcgcagcagcacggccaggcg
tgggatgccgttatccagcttctcgaggagtttaccggcatgatgggtgaagatgaaata
tctttggcgctgttccagcaaatgcttgaaacgggaacggaatcgcttcatttttcttta
attcctcccgcgcttgaccaagtatttgtagggaatatggatctctcaagaatgtacggc
acgtcctgcacattcgtcatcggtgccaatgacggcgttcttccggcgcgcccggatgaa
aacggcgtgctgtctgatgatgacagggagtggctgaaagcagtcggagtggagctgtct
tccgcggggcgtgagcggctgcttgatgagcattttctcatctatatggcgctgtcgagt
ccgtctgaccgtctttatgtgtcatacccgattgccgatgcggaaggaaaaacgctcctg
ccgtcaatcgttgtaaacaggcttggcgagctgtttcccgatcatcaggaaaagctgtca
gcggctgatcccgagcaggtaagcgaagaagagcagcttcagtatctcgtcaataaacag
gtggctcagacatatacggcaagtcagctcaggctgtggacaagagagtacgagatcagt
gacgtatggtggagcgcatacaatgtgctgatgaaagagcctgatcaccggcgtgcgaaa
aagctgttttcaagcttgtttttccgcaatgaggcgaagcgtctagaacggcctgtttcg
cgccagctttacggcgagcatattaaaggaagcgtctcccggatggaggcgtttaatgcc
tgccagttctctcattttgcatctcacgggcttcaattaaaagagcggcagtttttcaag
ctggacgcgccggatatcggccagctgtttcactccagcctgaagctgatttcagaccgg
cttcgtgagcagaagctggaatggcgcgatctgacgaaagatcagtgccggaatttctcc
tatgaagcggtggaacggcttgcgccaaagctgcaaaaagagattctgctcagctcaaac
agacacttttatgtgaaggaaaaactgcagaagatcgtcacgcgtgtttcaggcatatta
agcgagcatgcgaaggcgagcggtttcgtcccggtcggtcttgaactcggtttcggcgga
agcgggccgctgcctccgctcactttcacgctgaaaaacggctgtacgatggaactcgtc
ggacggatcgaccgcgtggataaagcggaaagttcaaaaggcctgctgctgagaatcgtt
gattataaatcaagcgacagggggcttgatctggctgaggtgtattacgggctcgctctg
caaatgctcacatatcttgacttatcgattacacattccgaagattggctcggtatgaaa
gcgaccccggcaggcgttttgtatttccatattcatgatccgatgattcaggccagtctg
ccgatggggcttgatgaaatcgagcaggaaatttttaagaaatttaaaatgaaaggcctt
ctcctcggtgaccgggaggcgatcagcctgatggacacgactttggaggaagggcgttca
aatatcgtcaatgccggtttgaaaaaggacggttctttaagatccgactcagccgcggtc
agcgaacgggattttcatctgctgacagaccatgtgcggcggacatttgaacaggcgggc
gaagcgataacggacgggcttgtgtccattaccccgtataagctgaaagataagacgcct
tgtacgtactgtgcgtttcaatcggtgtgccagtttgatgagtcgcttaaggaaaatgaa
taccgcagcctgaaagcggaaaaagacggcaccatactggattggctgaagaaggaggcg
gatgatgatgcaaattcctaa
DBGET
integrated database retrieval system
