Bacillus velezensis UCMB5033: RBAU_1042
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Entry
RBAU_1042 CDS
T02795
Symbol
addA
Name
(GenBank) ATP-dependent deoxyribonuclease (subunit A)
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bama
Bacillus velezensis UCMB5033
Brite
KEGG Orthology (KO) [BR:
bama00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bama03400
]
RBAU_1042 (addA)
Enzymes [BR:
bama01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBAU_1042 (addA)
DNA repair and recombination proteins [BR:
bama03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RBAU_1042 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CDG29010
LinkDB
All DBs
Position
1088220..1091924
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AA seq
1234 aa
AA seq
DB search
MQIPKPKDSIWTDDQWSAIVSSGRDILVAAAAGSGKTAVLVERMIRKITAEEDPVDVDRL
LVVTFTNASAAEMKHRIAEALEKELAKNPGSLHIRRQLSLLNRASISTLHSFCLQVLKKY
YYMIDLDPGFRMADQTEGELLGDEVLDELFEDEYAKGNQAFFELADRYTTDRHDLDLQDL
VKRVYEYSRSHPDPEVWLQSFVRLYDVTEESKMEELPFYQYVKEDAEMALFGAKQKLEKA
LELTKAPGGPAPRADNFLDDLQQIEELISCRHDFDALYERVPAVSFKRAKAVKGDEFDKA
LLDEATDLRNGAKKLIEKVKTDYFTRSPQDHLKSLADMKPVIETLVQLVISYGKRFEAAK
QEKSIIDFSDLEHYCLAILTAVDEEGRRVPSEAAVYYQDQFHEVLVDEYQDTNLVQESIL
QLVKSGNEEAGNLFMVGDVKQSIYRFRLAEPLLFLGKYKRFTESGEGAGQKIDLNQNFRS
RSDILDSTNFLFKQLMGGKIGEVDYDEQAALKLGASYPPNDAAKTELLLIDSADDADSSE
DAEDFETVHWEAKAIAGEIRKLVSSPFKVYEGKTKTHRNIQYRDIVILLRSMPWAPQLME
ELKNQGIPVYANLTSGYFEAVEVAAALSVLKVIDNPYQDIPLASVLRSPIVGCDENELAL
IRLEKKKAPFYEALKAYIANADRHDELYQKLRTFYDSLQKWRSFSTNHSVSELIWEVYRD
TGYFDYAGGMPGGKQRQANLRVLYDRARSYEATAFRGLFRFLRFIERMQERGDDLGTARA
LSEQEDVVRLMTIHSSKGLEFPVVFTAGLGRSFNMMDLNKSYLLDKELGFGTKYIHPELR
ISYPTLPLVAMKKKMRRELLSEELRVLYVALTRAKEKLFLVGSCKNREKQLAKWQAQADR
ADWLLSEFDRYQASSYLDFIGPALIRHRDMEAHRTPGLSSSEDIARDPSRFHIRMLQQSE
LLEENPKERAEEKSKRLKAIQQGEPIPDSFSFDDQARRLLEWEYPYRELTAIRTKQSVSE
LKRKQEYEDEYSGRSLIKPSGDTLLYRRPGFMMKKGLTAAEKGTAMHTVMQHIPLTHVPT
AEEAERTVRMLYEKELLTEEQQEAIDIEEIVQFFGTEIGKDLLGALRIDREVPFSMALPA
GEVYKDAETAGEPLLVQGIIDCLYETADGLYLLDYKTDRIEGKFRNGFEGAAPILQKRYE
TQIELYTKAVEQITKTKVKGRALYFFDGGHVLTL
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcctaaaccgaaagacagcatatggacggatgaccaatggagcgccatcgtt
tcttccggccgcgatattctggtcgctgccgcagccggatcaggtaaaacggccgtgctc
gtggaacggatgatcagaaagataaccgcggaagaagatccggttgatgttgacaggctc
cttgtggtgacctttacaaacgcctcagcagcggagatgaagcatcggatcgcggaagca
ttagaaaaagagctcgccaaaaatccgggatctctgcatatcagacggcagctctctctc
ttgaatcgggcgagcatttcgacgcttcactctttctgtctgcaagtgcttaaaaaatat
tattatatgattgatcttgaccccggttttcggatggctgaccagacggaaggcgaattg
ctcggagacgaagttcttgatgagctgtttgaagatgaatacgcaaaagggaatcaggcg
ttttttgagcttgcggacagatatacgacagacaggcatgatcttgatcttcaagacctt
gtcaaacgggtgtacgagtattcccggtcgcatcctgacccggaagtatggctgcaaagc
tttgtccgcctgtatgatgtgacggaagaaagcaaaatggaagagcttccgttttaccag
tatgtgaaagaagatgctgaaatggcgctcttcggggcaaaacaaaagcttgagaaggcg
cttgaactgacaaaagcgcccggcgggccggccccgcgcgctgataattttctggatgac
cttcagcagatagaagagctgatcagctgccggcatgacttcgatgcgctgtatgaacgg
gttcccgcagtctcatttaagcgggcgaaggcggtaaagggtgatgaatttgacaaagcg
cttttggacgaagcgaccgatttgcgaaacggcgcgaagaaactgatcgaaaaggtaaag
accgattattttacaagaagtccgcaagatcacttaaagagtttagcagatatgaagcct
gtcatcgaaacgctcgttcagctcgtgatatcgtacggaaaacgatttgaagcggcgaaa
caagaaaaatcaattattgatttctcagatttggaacattactgcctggcgattttaact
gcggttgatgaagaaggccggcgggtgccgagcgaagcggccgtttattatcaagaccag
tttcatgaagttctggttgatgaatatcaagataccaatcttgtgcaggaatctatcctg
cagcttgttaaaagcgggaatgaagaggcgggaaatctgtttatggtaggcgacgtcaaa
caatcgatctaccgtttcagacttgctgagccgctgctgtttctcgggaaatataaaagg
tttacagaaagcggggaaggcgcgggtcagaaaattgacctgaaccaaaatttccgcagc
cgctccgatattttggacagtacgaatttcttgtttaagcagctgatgggcggaaaaatc
ggcgaagtggactacgatgaacaggcggcattgaagctcggcgcatcgtatccgccgaat
gacgcggcaaaaacggaactgctgctgattgacagcgctgatgacgcagacagctccgag
gatgccgaagactttgaaaccgtgcactgggaagcgaaagcgatagccggggagatccga
aagcttgtctcatctccgtttaaggtatatgaaggcaaaacaaaaacacaccggaatatc
cagtaccgggatatcgtgattttgctgcgttccatgccgtgggcgccgcaattaatggaa
gagctgaaaaaccagggcattccggtgtacgccaatttgacgtcgggttactttgaagcc
gtggaggtggctgcggcgctttcagtcttgaaggtgattgataatccgtatcaggatatt
ccgcttgcttccgtgctgcgctcgcccatcgtcggctgtgacgaaaatgaacttgcgctg
atacgccttgaaaagaaaaaagcgccgttttatgaagcgctgaaagcatatatagcgaac
gctgacagacatgatgaactgtatcaaaaactgagaactttttatgacagtctgcaaaag
tggcggtcattttcgacgaatcattcggtgtctgagctgatttgggaagtataccgcgat
accggatattttgactatgcaggcggcatgcccggcggaaagcagcgccaggccaatctg
cgcgtcttgtatgaccgggcgcgctcgtacgaagcgacggcgttccgcgggttattccgc
tttttgcggttcattgaacggatgcaggagcgcggcgatgatctggggacggcccgggcg
ctcagcgagcaggaggatgtcgttcggctgatgacgatccacagcagcaaaggacttgaa
tttcccgtcgttttcaccgccggactcggcagaagttttaatatgatggatctcaacaaa
tcatacctgcttgataaagagctcggtttcggcacgaagtatattcatccggaactcaga
atcagctatccgactcttccgcttgtggcgatgaagaaaaagatgcgcagagagctctta
tccgaagaattgcgcgtattgtatgtggcgctgaccagagcgaaggaaaagctgtttctc
gtcggttcctgcaaaaaccgggaaaaacagctggccaaatggcaggcgcaagcagaccgg
gccgattggcttctttctgaattcgaccgctatcaggcgtcatcttatttggactttatc
gggccggcgctcatccgccaccgtgacatggaggcgcataggacgccgggactttcctca
tctgaggatatcgcgcgcgacccgtcgcgttttcacatccggatgcttcagcaaagtgaa
ttgctggaagagaatccaaaagagcgtgctgaagaaaagagcaaacgtctaaaagcaata
cagcagggtgagccgattcctgattcgttttcatttgatgatcaggcgcgccgtctgctt
gaatgggaatatccgtaccgagagctgacggctatcagaacgaagcagtcagtttctgag
ctgaagagaaagcaagaatacgaggatgaatacagcggccgctctctcatcaaaccgtca
ggagacacgcttttatacaggcgtcccggttttatgatgaaaaaagggctgacagccgcc
gaaaaagggacggcgatgcatacggtgatgcagcacataccgctgacgcacgttccgact
gccgaagaagcggagcggacggtccggatgctttacgaaaaagagctgctgacagaagaa
cagcaggaagctattgatatagaagaaattgtccagtttttcggaactgaaatcgggaaa
gaccttctcggggcgctgcggattgaccgggaagtgccgttcagtatggcgcttccggcc
ggcgaggtgtacaaggatgccgaaacggccggtgaaccgctgctcgtgcaggggattatt
gactgcctctatgaaactgcggacggtctctatttgctggactataaaactgatcggata
gaggggaaattccggaacggatttgaaggcgcggctccgattctgcaaaaaaggtatgaa
acacaaatcgaattgtatacaaaagcggttgaacaaattacaaaaacgaaagtgaaaggg
cgtgcgctctattttttcgatggaggtcacgttcttacactgtaa
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integrated database retrieval system
