Bacillus velezensis UCMB5033: RBAU_1427
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Entry
RBAU_1427 CDS
T02795
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bama
Bacillus velezensis UCMB5033
Pathway
bama00010
Glycolysis / Gluconeogenesis
bama00020
Citrate cycle (TCA cycle)
bama00260
Glycine, serine and threonine metabolism
bama00280
Valine, leucine and isoleucine degradation
bama00310
Lysine degradation
bama00380
Tryptophan metabolism
bama00620
Pyruvate metabolism
bama00630
Glyoxylate and dicarboxylate metabolism
bama00640
Propanoate metabolism
bama00670
One carbon pool by folate
bama00785
Lipoic acid metabolism
bama01100
Metabolic pathways
bama01110
Biosynthesis of secondary metabolites
bama01120
Microbial metabolism in diverse environments
bama01200
Carbon metabolism
bama01210
2-Oxocarboxylic acid metabolism
bama01240
Biosynthesis of cofactors
Module
bama_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bama_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bama_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
bama_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bama00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RBAU_1427 (pdhD)
00020 Citrate cycle (TCA cycle)
RBAU_1427 (pdhD)
00620 Pyruvate metabolism
RBAU_1427 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
RBAU_1427 (pdhD)
00640 Propanoate metabolism
RBAU_1427 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RBAU_1427 (pdhD)
00280 Valine, leucine and isoleucine degradation
RBAU_1427 (pdhD)
00310 Lysine degradation
RBAU_1427 (pdhD)
00380 Tryptophan metabolism
RBAU_1427 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RBAU_1427 (pdhD)
00670 One carbon pool by folate
RBAU_1427 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bama04147
]
RBAU_1427 (pdhD)
Enzymes [BR:
bama01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
RBAU_1427 (pdhD)
Exosome [BR:
bama04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
RBAU_1427 (pdhD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_binding_2
FAD_oxidored
HI0933_like
FAD_binding_3
NAD_binding_8
NAD_binding_9
AlaDh_PNT_C
Amino_oxidase
UDPG_MGDP_dh_N
DAO
Tox-PAAR-like
Thi4
Lys_Orn_oxgnase
3HCDH_N
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
CDG29395
LinkDB
All DBs
Position
1491079..1492491
Genome browser
AA seq
470 aa
AA seq
DB search
MVVGDFPIETDTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALIN
AGHRYENAKHSDDMGITAENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVIKGEAY
FVDSNSVRVMDENSAQTYTFKNAIIATGSRPIELPNFKYSERVLNSTGALALKEIPKKLV
VIGGGYIGTELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAM
AKGVEERPDGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTD
KQCRTNVPNIYAIGDIIDGPPLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELA
SVGYTEAQAKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASA
SDMISELSLAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggtagtaggagatttccctattgaaacagatactcttgtgattggtgcgggacccggc
ggctatgtagctgccatccgcgctgctcagcttggacaaaaagtaacagtcgttgaaaaa
gcaactcttggaggcgtttgtctgaacgtcggctgtattccttcaaaagcgctcatcaat
gcaggccatcgttacgagaatgcaaaacattcagatgacatggggatcactgctgagaac
gtaacggttgactttacaaaagtccaagaatggaaagcttctgttgtaaataagcttacc
ggcggtgttgcaggtcttttaaaaggaaataaagtggacgttataaaaggggaagcttat
ttcgtagacagcaactctgtccgcgtaatggatgagaactctgcgcaaacatacacattt
aaaaacgcaatcattgctaccggttctcgccctatcgaattgccaaacttcaaatatagc
gaacgcgttctgaactctacaggcgcacttgcgcttaaagaaattccgaaaaagctcgtt
gttatcggcggcggatatatcggtactgagcttggaacagcgtatgcgaacttcggaact
gaattggttattttagaaggcggagatgaaattcttcctggcttcgaaaaacaaatgagt
tctctcgttacccgcagactgaagaaaaaaggcaacgttgaaatccatacaagcgccatg
gctaaaggcgttgaggaaagacctgacggcgtaacagttacattcgaagtaaaaggcgaa
gaaaaaacggttgatgctgattacgtattaatcactgtcggacgccgtccgaacactgat
gagctcggccttgagcaagtcggtatcgaaatgactgaccgcggtgtcattaaaacagac
aagcagtgccgcacaaacgtaccgaacatttacgcaatcggtgacatcattgacggacct
ccattggctcacaaagcgtcttacgaaggtaaaatcgctgccgaagctatttcaggagag
ccggctgaaatcgattacctcggtattccggcggttgtattctctgagcctgaactggct
tctgtcggttacactgaagcacaggcgaaagaagaaggcattgaagtcgttgcagctaag
ttcccgtttgcagcaaacggacgtgcgctgtctcttaacgaaactgacggcttcatgaag
ctgatcactcgtaaagaagacggtcttgtaatcggtgcgcaaattgccggcgcaagcgct
tctgacatgatttctgaattgagcctggcgatcgaaggcggaatgactgctgaagatatc
gcaatgacaattcacgctcacccgacattgggcgaaatcactatggaagctgccgaagta
gcaatcggaagcccgatccatatcgtaaaataa
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