Bacillus velezensis UCMB5033: RBAU_1479
Help
Entry
RBAU_1479 CDS
T02795
Symbol
spoVD
Name
(GenBank) penicillin-binding protein
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
bama
Bacillus velezensis UCMB5033
Pathway
bama00550
Peptidoglycan biosynthesis
bama01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bama00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBAU_1479 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bama01011
]
RBAU_1479 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bama01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RBAU_1479 (spoVD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
CDG29447
LinkDB
All DBs
Position
1539933..1541852
Genome browser
AA seq
639 aa
AA seq
DB search
MRVSNVTVRKRLLLVLLIGVIIFLIIDSRLGYVQFVMGEKLTSLAKDSWSRNLPFEPERG
EILDRNGVKLATNKSAPTVFVVPRQIQNPIKTGKLLASVLNMSEEKVYKHITKKTSIEKI
SPEGRKISNKKAKEIKALDLKGVYVAEDSIRHYPYGSFLSHVLGFAGIDNQGLLGLEAYY
DDDLKGVKGSVKFYTDAKGKKMPDEADDYTPPKDGLDMKLTIDAKVQTIIERELDNAAAK
YNPDGMIAVAMNPKNGEVLGMSSRPDFDPADYQSVDPSVYNRNLPVWSTYEPGSTFKIIT
LAAALQEQKVNLQRDHFYDKGFAEVDGARLRCWKKGGHGSQSYLEVVQNSCNPGFVQLGE
RLGKQKLFQYIKDFGFGKKTGIDLQGEGTGILFPLDRVGPVEQATTAFGQGVSVTPIQQV
AAVSAAINGGTLYTPFIAKEWVDPVTKKTVKKQSPIAKRQVISQETSKQIRYALESVVAQ
GTGRNAFVEGYRVGGKTGTAQKVKDGKYLENNHIVSFIGFAPADDPSLVVYVAVDNPKGT
IQFGGTVAAPIVGNMMRDSLPELGVKPRKNQIEKKYQWNDTKTIEVPNVVGMSVSDLESL
LVNLNIDSSGKGSKIVKQSPAAGTKVKEGSKIRVYLSEE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtttcaaatgtaacggttcgaaaacgtttattactggttttgcttattggcgta
atcatttttttgatcattgacagcagattaggctatgtccaatttgtgatgggagaaaag
ctgacttcactggctaaggattcctggagccggaatttgccgtttgagcctgagcgggga
gagattcttgaccgaaacggcgtgaagctggctactaataaaagcgcgccgaccgtcttt
gtcgtaccgcgccagatccaaaatcccatcaaaacgggcaagcttctcgcgtcagtttta
aatatgtcggaagagaaggtctacaaacacattactaagaaaacctccatagaaaaaatc
tcacccgaggggcggaaaatttccaataaaaaagcgaaagaaatcaaagcgctcgactta
aaaggggtttatgtggctgaagacagcatccgccattatccgtacggaagctttttgtcc
catgttctcggttttgccggtattgataaccagggccttctcggtttggaggcttattat
gatgatgacttaaaaggtgtcaagggatccgtaaaattttatacggatgccaaggggaag
aaaatgcctgatgaagcggatgattacacccctccgaaagacggacttgatatgaaactg
acgattgacgccaaggttcagacgattatagaaagagagctcgacaatgcagcggcgaaa
tataacccggacggaatgattgcggtcgcaatgaatccgaaaaacggggaagtgctcggc
atgtcaagccgtcctgattttgatccggctgactatcaatcggtggatccgtctgtttac
aaccggaacctgccggtatggagcacatatgaaccgggttcgacctttaagattattacg
cttgcggcggctcttcaagagcaaaaagtaaacttgcaaagagaccacttttatgacaaa
ggatttgccgaggtcgacggcgcccgcctccgatgctggaaaaagggcggccacggttcg
caatcttatcttgaagtcgttcaaaattcctgcaaccccgggtttgtacagctgggggaa
cggctcggaaaacaaaagctgtttcaatatattaaggacttcggctttggaaagaaaaca
ggcattgatctgcaaggggaaggaacggggatcttattcccgcttgacagagtcggcccg
gtcgaacaggcgacaaccgctttcggacaaggggtttccgtcacgccgattcagcaggtg
gcagccgtttccgcagcaataaacggcggaacgctttatactccatttatcgccaaagag
tgggttgatcccgttacgaaaaaaaccgttaagaaacaatcgccgattgcgaaaaggcaa
gttatttcccaggaaacgtcaaagcagatcagatatgctttagaaagcgtcgtcgctcag
ggaacggggcggaatgcctttgtggaaggatatcgcgtcggcggaaaaacaggtaccgca
caaaaggtcaaagacggcaaatatctcgaaaacaaccatatcgtctcctttatcggtttt
gcgccggctgatgacccgagccttgtcgtgtatgtcgcggttgataatccgaaaggcacg
attcaattcgggggaaccgtcgccgcgccgattgtcggaaatatgatgagagacagtctg
cctgagctcggcgtgaaaccgcgaaaaaatcaaatcgagaaaaaatatcaatggaacgac
acaaaaacaatagaggttccgaatgttgtagggatgtctgtctctgatcttgagtcgctg
cttgtcaatttgaatattgactcctcaggaaaaggaagcaaaattgtgaaacaatcacct
gcagccggaacgaaagtaaaagaaggctcaaagatccgtgtttacttgagtgaagaatga
DBGET
integrated database retrieval system
