Bacillus velezensis UCMB5033: RBAU_1864
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Entry
RBAU_1864 CDS
T02795
Symbol
rtbI
Name
(GenBank) ribonuclease toxin of toxin-antitoxin systems RttI-RttJ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bama
Bacillus velezensis UCMB5033
Pathway
bama03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bama00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBAU_1864 (rtbI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bama03019
]
RBAU_1864 (rtbI)
03400 DNA repair and recombination proteins [BR:
bama03400
]
RBAU_1864 (rtbI)
Enzymes [BR:
bama01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBAU_1864 (rtbI)
Messenger RNA biogenesis [BR:
bama03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RBAU_1864 (rtbI)
DNA repair and recombination proteins [BR:
bama03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RBAU_1864 (rtbI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CDG29832
LinkDB
All DBs
Position
complement(2042969..2044747)
Genome browser
AA seq
592 aa
AA seq
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MLEKAQSLLAHYFGYDSLRAGQKQAIQSVAEERKNTVCIMPTGGGKSICYQIPALLFEGT
TIVISPLISLMKDQVDALEEAGIAAAYINSTQTSRDIHERLTGLKQGAYRLFYITPERLT
SSEFIHILQNITVPLVAIDEAHCISQWGHDFRPSYRNIEILFNELKEPPVIIALTATATP
EVHDDICKQLHIKKEQTVYTGFARENLTFKVVKGENKDRFIERYLEKNKHEAGIIYTATR
KETDRLYEKLKRGGINAGRYHGGLADDDRKDQQERFLNDQIQVMVATSAFGMGIDKSNIR
FVLHAQIPKDMESYYQEAGRAGRDGLNSECVLLFSPQDIMVQRFLIDQSAAGEEKQKQDL
KKLRQMVDYCHTEDCLQRFILKYFGENEAEACGACGNCTDTRTAHDVTKEAQMVLSCIIR
MNERFGKTMVAQVLSGSKNKKVLENGFSSLSTYGIMKHQSASEISDFIEFLISDEYIRMA
DGTFPTLMVTQKGRDVLLGKSAVARKEALQAAAVTENDELFELLRRLRKEIAAEQGVPPF
VVFSDQTLKEMSAKLPKTDQDLLSVKGVGEQKRLKYGAVFLEEIRNYVRETE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgctggagaaagcccaatcccttctggcgcattattttggctacgacagtcttcgcgcg
ggccaaaagcaggcgatacaatcagttgcagaggagagaaaaaacacggtctgcattatg
ccgacagggggcggaaaatcaatctgctatcagattcccgcactgctgtttgaaggaacc
acaatcgttatttcccctcttatttccttaatgaaagatcaagtcgacgcgcttgaagaa
gcgggtatcgcggcagcttatattaacagtacccagacaagccgtgacattcatgagcgc
ctgaccggtttgaaacaaggggcttaccggctcttttacatcacaccggagcgtttgact
tcttctgaattcattcacatcctgcagaatattacggttcctcttgtcgccattgacgaa
gctcactgtatatcgcaatggggacatgatttcaggccgagttaccggaatatcgaaatc
ctttttaatgaattaaaagaaccgcccgtcatcatcgcattaacggcgacggctacgcct
gaggttcatgatgacatctgcaaacagcttcatattaagaaagaacaaactgtatatacc
ggttttgccagagagaatttaacgtttaaagtagtaaagggcgaaaacaaagaccggttt
atcgagcggtatctggaaaaaaataaacacgaagccggcattatatatacagcgacaaga
aaagaaaccgaccgtttatatgagaaattaaaacgcggcggcatcaatgccggccgttat
cacggcggattggcggatgatgacagaaaagaccagcaggagcggtttcttaacgatcag
atacaagtgatggtagctacgtccgctttcggaatgggaatcgataagagcaacatcagg
ttcgttttacacgcgcagattccgaaagatatggagagctattaccaggaagccggacgg
gccgggcgcgacggtcttaacagcgagtgtgtgctcttgttttcgccgcaggatattatg
gtgcagcgttttttaatagaccaatcggccgccggagaagaaaaacaaaagcaggatctc
aaaaaactgagacagatggtggattactgtcatacggaagattgcctgcagcggtttatt
ctgaagtatttcggcgagaatgaggcggaagcttgcggagcatgcggcaattgcactgat
acaaggaccgcccatgacgtcacaaaagaagcgcagatggtattgtcatgtatcatcaga
atgaatgagcgcttcggaaaaacgatggtggcgcaggtgcttagcgggtcaaaaaataaa
aaagtgctggaaaacggcttcagcagcctgtcgacttacggcattatgaagcatcaatcc
gcatcggaaatcagtgattttatcgaattccttatttcagatgaatatatcagaatggcg
gacggcacatttccgacgcttatggtcacccaaaaaggcagggacgttctgcttggaaaa
agcgcagtcgcgagaaaagaagctttacaggccgccgccgttaccgaaaatgatgaatta
tttgagcttctccggcgtctccgcaaagagattgcagctgaacagggtgtgcctccattt
gtcgtgttctcagatcagacgttaaaagaaatgtcggcgaaacttccgaaaacagatcag
gatcttctttccgtaaaaggggtcggggaacaaaaaagattgaaatacggagcagttttt
ttagaagaaatccgaaattatgtaagagaaacagagtga
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